Physeter macrocephalus (sperm whale): 102995701
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Entry
102995701 CDS
T06011
Symbol
COLEC12
Name
(RefSeq) collectin-12 isoform X1
KO
K10062
collectin sub-family member 12
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102995701 (COLEC12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102995701 (COLEC12)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pcad04091
]
102995701 (COLEC12)
Membrane trafficking [BR:
pcad04131
]
Endocytosis
Phagocytosis
Opsonins
102995701 (COLEC12)
Lectins [BR:
pcad04091
]
C-Type lectins
Asialoglycoprotein and DC receptors
102995701 (COLEC12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Lectin_C
Filament
KxDL
ATG17_like
UL45
SepF
Fez1
Alpha-2-MRAP_C
Motif
Other DBs
NCBI-GeneID:
102995701
NCBI-ProteinID:
XP_023976791
Ensembl:
ENSPCTG00005018845
UniProt:
A0A2Y9SDM0
LinkDB
All DBs
Position
19:34942519..35156206
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AA seq
742 aa
AA seq
DB search
MKDDFAEEEEVHSFGYKRFGIQEGTQCTKCKNNWALKFSIILLYILCALLTITVAILGYK
VVEKMDSVTGGMETSRQTYDDKLTAVESDLKKLGDQTGKKALSTNSELSTFRSDILDLRQ
QLREITEKTSKNKDTLEKLQVSGDALVDQQSQLKETLENNSFLITTVNKTLQAYNGYVTN
LQQDTSVLQGNLQSQMYSHNVVIMNLNNLNLTQVQQRNLITNLQRSLDDTSQAIQRIKND
FQNLQQVFLQAKKDTDWLKEKVQSLQTLAANNSALAKANNDTLEDMNSQLSSFAGQMDNI
TTASQANEQNLKDLQDVHRDAENRTAVKFSQLEERFQLFETDIVNIISNISYTAHYLRTL
TSNLNEVRTTCTDTLTKHTDDLTSLNNTLANIRLDSVSLRMQQDLMRSRLDTEVANLSVI
MEEMKLVDSKHGQLIKNFTILQGPPGPRGPKGDRGQQGPPGPTGNKGQKGEKGEPGPPGP
AGERGPIGPVGPPGERGGKGSKGLQGPKGSRGSPGKPGPQGPSGDPGPPGTPGKDGLPGP
QGPPGFQGLQGTVGEPGVPGPRGLPGLPGVPGMPGPKGPPGPPGPSGAAVPLALQSEPTA
APEANGCPPHWKNFTDKCYYFSVEKEIFEDAKLSCEDKSSHLIFINTREEQQWIKKQMVG
RENYWIGLTDSEQENEWKWLDGTSLEYKNWKAGQPDNWGHGHGPGEDCAGLIYAGQWNDF
QCEDINNFICEKDRETVLSPAL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgacttcgcagaggaggaggaggtgcattccttcggttacaagcggtttggt
attcaggaaggaacacaatgtaccaaatgtaaaaataactgggcactgaagttttctatc
atattattatacattttgtgtgccttgttaacaatcacagtagccattttgggatacaaa
gttgtagagaaaatggacagtgttacaggtggcatggagacatctcgccaaacctatgat
gacaagctcacagcagtggaaagcgacctgaaaaaattaggggaccaaaccgggaagaaa
gctctcagcaccaactcagaactctccacgttcaggtcagacattctggatcttcgtcag
cagcttcgtgagattacagaaaagactagcaagaacaaagatacgctggagaagttacag
gtgagcggggatgcactggtggaccagcagagtcaactgaaagaaactttggagaataac
tccttcctcatcaccactgtaaacaaaaccctccaggcatacaatggctatgtcacaaat
ctgcagcaagacacgagtgtgcttcagggcaacctgcagagccagatgtattctcacaac
gtggtcatcatgaacctcaacaacctgaacttgacccaggtgcagcaaaggaacctcatc
acaaatctgcagcgctctttggatgacacaagccaggcaatccagcgaatcaagaatgac
ttccaaaacctgcagcaggttttccttcaagccaagaaggacacggattggctgaaggag
aaagtgcagagcttgcagacgctggctgccaataactctgccttggccaaagccaacaat
gacaccctggaggacatgaacagccagctcagctcctttgcagggcagatggacaacatc
actacggcctcccaagccaatgagcagaacctgaaagatctgcaggatgtacacagggac
gcagagaacagaacggctgtcaagttcagccagctggaggagcgcttccagctctttgag
accgacattgtgaacatcattagcaacattagctacacggcccactacctacggacactg
accagcaacctgaatgaagtcaggaccacgtgcacggatacgctgaccaaacacacggat
gatctgacctccttgaataacacactggccaacatccgtttggattctgtttccctcagg
atgcaacaagatttgatgaggtcgaggttggacactgaagtggccaacttatcagtgatt
atggaagaaatgaagctggtggactccaagcatggacagctcatcaagaattttacaata
ctacaaggtcctcctggccccaggggtccgaaaggtgacagaggacagcagggacccccg
ggccccactggcaacaagggacagaaaggagagaagggggagcctggccctcccggcccg
gccggtgagaggggcccgatcgggccggtcggcccccctggagagcgtggcggcaaaggc
tccaaaggcctgcagggccccaaaggctcccgcgggtcccccgggaagcccggccctcag
ggccccagtggggacccaggcccccccggcacaccaggcaaggacggactcccgggcccc
cagggcccccccggcttccagggactgcagggcaccgttggggagcctggggtgcctggg
ccgaggggtctgccgggcttgcctggggtgccgggcatgccgggtcccaagggccccccc
ggtcccccgggcccatcaggggcggcggtgcccctggccctgcagagcgagccaaccgca
gcacccgaggccaacggctgcccacctcactggaagaacttcacagacaaatgctactat
ttttcggttgaaaaagaaatttttgaggacgcaaaactttcctgtgaagacaagtcttca
catctcattttcataaacacaagagaggaacagcaatggatcaaaaagcagatggtaggg
agagagaactactggatcggcctcacagactcagagcaggaaaacgaatggaagtggctg
gatgggacatctctagagtataaaaattggaaagctggacagccagataactggggtcat
ggccatgggcctggagaagactgtgctgggctgatttatgctgggcaatggaacgacttc
caatgtgaggacatcaataacttcatttgcgaaaaagacagggagacagtactatcacct
gcattataa
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