Physeter macrocephalus (sperm whale): 102995743
Help
Entry
102995743 CDS
T06011
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03018
RNA degradation
pcad03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102995743 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
102995743 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
102995743 (LSM2)
03041 Spliceosome [BR:
pcad03041
]
102995743 (LSM2)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102995743 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
102995743 (LSM2)
Spliceosome [BR:
pcad03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
102995743 (LSM2)
Complex C
U2 snRNP components
102995743 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
102995743
NCBI-ProteinID:
XP_007110171
UniProt:
A0A2Y9EWM2
LinkDB
All DBs
Position
18:84988249..84993500
Genome browser
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctattcctttttcaagtcccttgtgggcaaggatgtggtcgtggaactcaag
aatgacctgagcatctgtggaaccctccattctgtggatcagtatctcaacatcaaacta
actgacatcagtgtcacagaccctgagaaataccctcacatgttatcagtgaagaactgc
ttcatccggggctcagtagttcgctatgtgcagttgccagcagatgaggtcgacacacag
ttgctacaggatgcagcaaggaaggaggccctgcagcagaagcagtga
DBGET
integrated database retrieval system
