Physeter macrocephalus (sperm whale): 102995936
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Entry
102995936 CDS
T06011
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30
KO
K09271
transcription factor SOX15/30
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
102995936 (SOX30)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
102995936 (SOX30)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
102995936
NCBI-ProteinID:
XP_007115491
Ensembl:
ENSPCTG00005002511
UniProt:
A0A2Y9F743
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Position
8:complement(151529594..151562722)
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AA seq
763 aa
AA seq
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MERARPELRQLPRATPPRPLRPAPPPMPVEGASFRAAAAEPSASPPAPCAAAIATVVSSC
GEAPASGVQPAAQRVLQVNPEQVLLLPPGPPLPLAWEEGAAASPAQARLLQLRPDLLLLP
PPSASEGAPCRPHLHPVQPRPVHVKAEKQEPDPSLDPSVGPRRAIKAGPKASRAAKAGGP
GPALDSPRGDEKGKLEEEEEVMSYTAKGGEGKSLAAIREGVIKTEEAERLREDSRLGTEP
ASSGLVHGSKDVILTQPSSAFGPHQQELRIPLTLHTVPPGARIQFQGPPPSELIRLTKVP
LTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMVWARI
HRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVYQPRP
GKRKRFPLSVSNVLSGTTQNIISTNPTTVYPYCSPTYSVVIPSLQNTITHSVGEAPPAVQ
LPTPAVQRPSPITLFQPSVSSTAQVAVQAPSLPLCPPLPPQCFAGPSQTDTHQLHSGASC
SVKRPTPVSLESTSRIPTSASTAHARFAASTIQPPKEYPSVSTCPRSAPIPQAPPIPHPH
VCQPPPLGHAATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSVPECLG
YYEDSYQIHEAMFSALNSDYPFRDYPDERAHSEDFRRCESMDGTSYCNSHSHSGEEYLNP
MPQLDTGALESVFTAPTSTPSNVQQVNVTDSDEEEEEKVLRNL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagctccgccaactgccgcgggcgaccccgccgcgcccgctg
cgccccgctccgcccccgatgcctgtcgagggcgcctcctttcgggcagcggccgcggag
ccctctgcgtcgccgcccgccccgtgcgcggccgccattgcgaccgtagtctcgtcgtgc
ggggaggctccggcgtcgggcgtacagcccgcggcacagcgggtgctgcaggtgaacccg
gagcaggtgttactgttgccgcctgggccaccattgcctctggcctgggaggaaggcgca
gccgcctctcccgcgcaggcgcggctgctgcagctgaggcccgacctgctactgctgccg
ccgccttcggcgtccgagggcgccccctgcaggcctcatttgcacccggtgcagccccgg
ccggtgcacgttaaggcagagaagcaggagccggaccccagcttggatccgtcagtggga
cctcggagggccatcaaggcgggccctaaggcctccagggcggcaaaggcgggaggcccc
gggccggccctcgacagcccacgaggggacgagaagggcaagttggaggaggaggaagag
gtcatgagctacacggcgaaaggcggggaaggcaaaagcctggcggctatcagagaagga
gtcatcaaaacggaggaggctgagagactccgcgaggactccaggctcggcacagagccc
gcgtccagtggcctggtccatggcagcaaagatgtcatcctgacccagccgtccagtgcc
tttgggccgcaccagcaagagcttaggatccctttgactcttcacaccgtgccccctggg
gcccggatccagtttcagggacctccaccttcagagctgatacgattgaccaaggtcccc
ttgacaccggtgcctattaaaatgcagtccttactggagccttctgtaaaaattgaaacc
aaagatgtcccgctcaccgtgcttccctcagatgcaggaataccagatactcccttcagt
aaggacagaaatggtcatgtgaagcgacccatgaatgcatttatggtttgggcaaggatc
caccggccagcactagccaaagctaacccagcagccaacaatgcagaaatcagtgtccag
ctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccctattatgatgaagca
caaaagattaaagaaaagcacagagaggaatttcctggttgggtttatcagcctcgtcca
gggaagcgaaaacgcttccctctaagcgtttccaatgtactttctggtaccacacagaat
atcatctctacaaatccaacaacagtttatccttattgctcacctacctactctgtggta
attcccagcctacagaacaccatcactcattcagttggtgaagctccacctgccgtccag
ctgcccacacctgcagtccagcgcccaagccccatcacgcttttccagccgagcgtctcc
agtactgcccaggtggctgtccaggctccaagtttgcccctctgtccaccactcccaccc
cagtgctttgctgggccctcccaaacagacactcatcagctgcattctggagccagttgc
tctgtgaagagacccactcctgtctctctggagagcaccagcaggattccaactagtgca
agtactgcccacgccagatttgcagcctctacaatccaacctcccaaggagtatcccagc
gtctccacttgtcccagaagtgctccaatcccacaagctcctcctattccacatccacat
gtctgccagccccctccccttggccatgcagccacattgtttgggaccccaccacgattc
tcttttcatcacccttacttcctacctggacctcactacttcccatcaagcacgtgccct
tatagtcggcctccttttggctatggaaattttccaagttcagtgccagaatgccttggt
tattatgaagacagttaccaaatacatgaggctatgttttcagctttaaatagtgactat
ccttttagagactacccagatgaacgtgctcacagcgaagattttcggcgttgtgagagc
atggatgggacctcttactgtaacagtcatagccacagtggcgaagaatacttaaatccc
atgcctcagctggacactggagccttggaaagtgtcttcacagccccgacatcaactccc
tctaacgtccagcaagtcaatgtcactgacagtgatgaggaagaagaagaaaaagtgctc
aggaatttataa
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