Physeter macrocephalus (sperm whale): 102996089
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Entry
102996089 CDS
T06011
Symbol
DDX53
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD box protein 53
KO
K21869
ATP-dependent RNA helicase DDX53 [EC:
5.6.2.7
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102996089 (DDX53)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102996089 (DDX53)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
102996089 (DDX53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
ResIII
MOEP19
Cas3-like_C_2
HEM4
KH_2
KH-I_KHDC4-BBP
KH_DEAH11_2nd
Motif
Other DBs
NCBI-GeneID:
102996089
NCBI-ProteinID:
XP_023970990
UniProt:
A0A2Y9S4A0
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All DBs
Position
21:7000887..7002773
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AA seq
628 aa
AA seq
DB search
MAWAPERKRAEPNWRALRASQDGMGGRGRGCSSTSSHLEPRAFGSQEQPLCFPIRNSMVG
AVTGHGGSKIKDIQDMTSTKIQIIKGDSEAEVKIFGSKDMKAKAKAAIETLVKKQERHYS
SESSVDNAASQPTVGRGSGRDNTARGAQPLIDXDQVKAEVVQWEKRKGADLSPIKKNFYI
ESKATRSLSQVQAHTWRKENFNIMCDDLKDGEKRPNPNPICKFEDAFQHYPELMKSIEKA
GFXNPMPIQSQAWTLILQGRDLIGTAQTGTGKTLSYLMHGFIHLHSQPISREQRNGPSLL
VLTSTRELALQVEAECSKYSYKGLKSVCIYGGGNRKGQIQDATKGVDIIIATPGRLNDLQ
MNNFVNLRSITYLVLDEADKMLDLEFERPIMTILLAVRPDRQTVMTSATWPDTICRLAQS
YLKEPMIVYTGTLDLVNVNTVKQNIIVTTEEEKRSLIREFLQSLSPKDKVIVFVSRKLVA
DDLSSDLSNQGITVQSLHSDREQSDREQALEDFKSGKVKILSATDLASQGLDISDVTHVC
NYNSPWNIEEYVQRVGRTGRAGEMGVSVTLMTQGDWKIASKLIKVLQRANQSVPEDRVWM
XERYKLPRQNRDPKNKSRKSXEKSRKFY
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggccccagagcggaagagagcggagccgaattggagagctctcagggccagc
caggatgggatgggtggcagaggcaggggctgcagcagcacctccagccacctggagcct
agggctttcggctcccaagaacaaccgctctgctttccaataaggaacagtatggttggt
gcggtgactggtcatggtggatcaaaaataaaagacattcaggatatgacaagcaccaaa
atacagatcataaaaggtgattctgaagcagaggtaaaaatttttggcagcaaagacatg
aaagccaaggccaaagcagctatagaaactcttgttaagaaacaagaaagacactacagt
tcagaatccagtgttgataatgctgcatcccaacccactgttggaagaggctcaggcaga
gataacactgctagaggagctcaaccactgatagactaggatcaagtaaaggccgaagtt
gtacagtgggaaaaaagaaaaggggcagatttatcaccaattaagaaaaacttttacata
gaatccaaagcaacaaggtcattgtctcaagtgcaagcacacacttggagaaaggaaaat
ttcaacataatgtgtgatgacttgaaagatggtgaaaaacgtcccaaccccaatccgatt
tgcaaatttgaagatgctttccaacattatcctgaacttatgaaaagcattgaaaaagct
ggtttttgaaacccaatgccaattcagtcacaggcatggactcttattctacaaggaaga
gatcttataggaactgcccaaactggaacgggcaaaacactgtcctatttaatgcatggg
tttattcatctccattctcaaccaatatctagagaacaaaggaatggacccagcttgcta
gtccttacatccactagagaattagctcttcaggtggaagctgaatgttctaagtattca
tataaaggtcttaaaagtgtttgtatatatggcggtggaaacagaaaaggacaaatacaa
gatgccaccaaaggcgtagacatcatcattgcaactcctggaagactgaatgatctgcaa
atgaataactttgtcaacctaagaagcataacctacttagtcttagatgaggcagataaa
atgctggatctggagtttgaacgcccaataatgacgattttattagctgtgcgcccagac
cggcaaactgttatgacaagtgcaacttggccagataccatttgtcgacttgcacaatct
tatttgaaagagcctatgattgtttatactggtactctggatctagttaatgtaaacact
gtgaagcaaaacataattgttaccacagaagaagaaaaacgatctcttatccgagaattc
ctacagagcttgtcacccaaagacaaagtcatcgtgtttgtcagcagaaaacttgttgct
gatgacttatcaagcgatttaagtaaccaaggcataactgtacaatccctgcacagtgac
agagaacagagtgatcgtgagcaagcattagaggactttaaaagtggaaaagtgaaaata
ctgagtgctactgatttagcatcccaaggcctcgatattagtgatgtcacacatgtatgt
aattacaattctccatggaatattgaagaatatgtacagagagtagggcgtactggaaga
gcaggagagatgggcgtatcagttacccttatgactcaaggggattggaagattgccagt
aaattgattaaagttctgcaaagagcaaatcagagtgtcccagaagatcgtgtatggatg
nctgagcgatacaaattacctagacaaaacagggacccaaaaaataaatcaagaaaatct
taagaaaaatccagaaagttttactga
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