Physeter macrocephalus (sperm whale): 102996240
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Entry
102996240 CDS
T06011
Symbol
ERCC2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03022
Basal transcription factors
pcad03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102996240 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
102996240 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102996240 (ERCC2)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102996240 (ERCC2)
03400 DNA repair and recombination proteins [BR:
pcad03400
]
102996240 (ERCC2)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102996240 (ERCC2)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102996240 (ERCC2)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
102996240 (ERCC2)
DNA repair and recombination proteins [BR:
pcad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102996240 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
102996240
NCBI-ProteinID:
XP_023988457
Ensembl:
ENSPCTG00005018423
UniProt:
A0A2Y9TFX4
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLSFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYIRAQYQRDPSLPHCRFYEEFDVHGRQVPLPAGIYNLDDL
KAMGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccatacgactacatctacccggag
cagttctcctacatgctggagctcaaacgcacgctggatgccaagggtcatggggtcctg
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcgtaccag
cgggcgtacccactggaggtgactaaactcatctactgctcgaggactgtgcctgagatt
gagaaggtgattgaagagcttcgaaagttactcaacttctatgagaaacaggagggcgag
aagctgtcgtttttggggctggctctgagctcccgaaagaacctgtgtattcatcccgag
gtgacgcccctgcgctttgggaaggatgtcgacggaaaatgccacagcctcacggcctcc
tacataagggcacagtaccagcgggaccccagcctgccccactgccgcttctacgaggaa
tttgatgtccatgggcgccaggtgcccctccccgctggcatctacaacctggacgacctg
aaggccatggggcagcgccagggctggtgcccatacttccttgcccgatactcaatcctg
cacgccaacgtggtggtctacagctaccactacctcctggaccccaagattgccgacctg
gtgtccaaggagctggcccgcaaggccgtcgtcgtcttcgacgaggcccacaacattgac
aatgtctgcatcgactccatgagtgtcaacctcacccgccggaccctggatcggtgccag
ggcaacctggagaccctgcagaagacggtgctcaggatcaaggagacggacgagcagcgt
ctgcgggacgagtaccggcgcctggtggaggggctgcgggaggccagcgccgcccgggag
accgacgcccacctggccaaccccgtgctgcccgacgaggtgctgcaggaggcggtgcca
ggctccatccgcacggccgagcacttcctgggcttcctgcggcggctgctggagtacgtc
aagtggcggctgcgcgtgcagcacgtggtgcaggagagcccgcccgccttcctgagcggc
ctggcccagcgcgtgtgcatccagcgcaagcccctcaggttctgcgccgagcgcctccgc
tccctcctgcacaccttggagatcgcggacctcgctgacttctcccctctcaccctcctg
gctaacttcgccacgctcgtcagcacctacgccaagggtttcaccatcatcattgagccc
tttgacgacaggaccccaaccatcgccaaccccatcctgcacttcagctgcatggacgcc
tcgctggccatcaaacccgtgttcgagcgcttccagtccgtcatcatcacatctgggacg
ctgtccccgctggacatctaccccaagatcctggacttccaccccgtcaccatggcaacc
ttcaccatgacattggctcgggtctgcctctgccccatgatcattggccgtggcaatgac
caggtggccatcagctccaaatttgagacccgggaagatatcgcggtgatccggaactac
ggaaacctcctgctggagatgtccgctgtggtgcccgatggcatcgtggccttctttacc
agctaccagtacatggagagcaccgtggcctcctggtatgagcagggcatcctcgagaac
atccagaggaacaagctgctctttattgagacccaagatggggctgagaccagtgtggcc
ctggagaagtaccaggaggcctgcgagaacggccgtggggccatcctgctctcggtggcc
cgaggcaaagtgtctgagggaattgactttgtgcaccactacggccgggccgtcatcatg
ttcggggtgccctacgtctacacgcagagccgcattctcaaggcgcgactggaatacctt
cgggaccagtttcagattcgagagaacgactttctgaccttcgacgccatgcgccacgcg
gctcagtgtgtgggtcgggccatcaggggcaagactgactatggcctcatggtcttcgcc
gacaagcggtttgcccgggccgacaagcgggggaaactgccccgctggatccaggagcac
ctcaccgacgccaacctcaacctgaccgttgacgagggggtccaggtcgccaagtacttc
ctgaggcagatggcacagccattccaccgggaggatcagctgggcctgtccctgctcagc
ctggagcagctggagtcggaggagacgctgcggaggatagagcagatcgcccagcagctg
tag
DBGET
integrated database retrieval system
