Physeter macrocephalus (sperm whale): 102996420
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Entry
102996420 CDS
T06011
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102996420 (TRMT13)
Enzymes [BR:
pcad01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
102996420 (TRMT13)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
102996420 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
102996420
NCBI-ProteinID:
XP_007122385
Ensembl:
ENSPCTG00005001537
UniProt:
A0A2Y9FGG3
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All DBs
Position
4:complement(95580588..95604768)
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AA seq
481 aa
AA seq
DB search
MAASAPTPHGTGFPTEGRCGYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSRERPKPDFFIQDINAGLKDETEIPEQLVPISFLSEEQMG
NLIKKLRKASEGLNSTLKDQIMSHPALHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKIPLLSKEKLPVVGIGKHLCGVATDLALRCLVETYAASCEERNEEPLAKRVK
NDKTEKEINTLAKEGNEKNIPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMQKTSLEASNISTKRKDKQNDGSEEHDDGGYRITDDSTESLPGFLT
VEEKKKIGHLCKLLIDQGRINYLQQKGFNPALQYYTDPLVSLENVLLTALPNHSSSPETT
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttctgcgccaacgccgcatggaactggctttccaacagaggggcgatgtggc
tactatgtggaaaagaagaagcgcttctgcaggatggtggtggcagcaggaaaaaggttc
tgtggtgaacacgctggagccgcggaggaagaaaatgctcggaaaagaatcctgtgtcct
ttagatccaaaacacacagtatatgaagatcaactagcaaaacatttgaaaaaatgtaac
tcaagagagaggccaaaacctgacttctttattcaagatattaatgcaggcttaaaagat
gaaacagaaatacctgaacaattagttccaatttcttttctctctgaagagcagatggga
aacttaattaagaaactgagaaaagcaagtgagggtttgaactctacacttaaagatcaa
attatgtcccatccagcgttgcatgatgcccttaatgaccctaaaaacggtgattctgca
accaaacatctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcattgggtt
gatattgccttaaaagatgctgaaaaagttcacttcatcctagtagaaaaggtgaccaca
agattcaaggtagatggcaaacacagaaagaaaaattcagtgtttgagagacttcaaatt
gatattcagcacctgtgtttgaacaagattcctttgctaagcaaagaaaaactacctgtg
gtaggaattggaaaacatctgtgtggtgtggcaacagatcttgcattacgatgtttggtt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcgtaaag
aatgataaaacagaaaaagaaattaacactttggccaaggaaggaaatgaaaaaaatatc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcagggctctaggccttggagcagtggaa
ttccactatttccagcgaatgagtagttgggcgacttgtgggatgcaaaaaacatctttg
gaagcttcaaatatctccacaaaaagaaaagataaacagaatgatggcagtgaagagcat
gatgatggaggatacagaatcacagatgacagcactgagagtttgcctgggtttcttact
gttgaagaaaagaagaaaatagggcatctttgtaaattgctgattgaccaaggccgaatc
aactatttacagcagaaaggattcaatcccgctttacagtattatacagaccctctggtg
tctttggaaaatgtattgttaactgctttaccaaatcattcttcatcaccagaaacaact
gcttaa
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