KEGG   Physeter macrocephalus (sperm whale): 102996639
Entry
102996639         CDS       T06011                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    102996639 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcad03400]
    102996639 (XRCC1)
DNA repair and recombination proteins [BR:pcad03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     102996639 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT PTCB-BRCT BRCT_2 F5_F8_type_C
Other DBs
NCBI-GeneID: 102996639
NCBI-ProteinID: XP_028334117
UniProt: A0A455AD90
LinkDB
Position
17:complement(9860910..9887056)
AA seq 637 aa
MPEIRLRHVVSCSSQDSTYRAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLAGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNSNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDAPYGLSFVRFHSPPDKEEAEASSQKVTKLGQFRVKEEDESA
SSLRPGALFFSRINKTPPVAASDPAGPSYAAATLQASSAASSVSPASKTVGSTSKESPRG
KRKLDLSHEEKKTPSKPSAQPSPPALKRPKLPAPTPAPAPAPVPAAARGAAPGKPRGEGA
EPRAPRAGPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAF
ANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPDSSSEDEGGSHGGSSGDE
APKPPRKRPQTKAKPSQAAGPSSPQRPPTPEETKPPSPGPQEDTDTKGEQSEGQDNGAED
SGDTEDELRRVAERKEQRPPSGEENGKDPYAGSTDENTDSEGPPESPNLPIPELPGGKSS
LLMWDLALLLLCHDLPQPVLGWLLPPVTCLPGSSPPVPSLCHLLVLLGLFPSFQHPLLTS
LSVPVLTSAVTASITAQPQARPPLAFHSITTLPGLFH
NT seq 1914 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgccatgtggtatcctgcagtagccaggactcgacctaccgt
gcagaaaaccttctcaaggcagacacttatcggaaatggcgggcagccaaggcgggcgag
aagaccatctctgtggtgctgcagttagagaaggaggagcagatacacagcgtggacatt
gggaatgacggctcagccttcgtggaggtgctggcgggcagctcagctggaggcgccggg
gagcaggactacgaggtccttctggtcacctcgtctttcatgtccccttccgagagtcgc
agtggctcaaattccaaccgcgttcgcatttttgggcccgacaagttggtccgggcagca
gcagagaagcgctgggaccgtgtcaaaattgtctgcagccagccctacagcaaggatgcc
ccctatggcctgagttttgtaaggtttcacagccccccagacaaagaggaggccgaggcc
tcatcccagaaagtgaccaagctcggccagttccgcgtgaaggaggaggatgagagcgcc
agctccctgagacccggggctctcttcttcagccggatcaacaagacgcccccagtcgca
gccagtgacccagcaggacccagctatgcagctgctacgctgcaggcctccagtgccgcc
tcctcggtctctccggcctccaagacagtagggagcacctccaaggagtcccccagaggc
aagaggaagctggatttgagccacgaagaaaagaagacccccagcaaaccgtccgcccag
ccctcaccacccgccctcaagagacccaaattgccagctcccacccctgccccagcccct
gcccctgtccctgccgcagcacggggggcggcgccagggaagccccgaggagaaggcgct
gagcccagggccccccgcgccggcccgcaggagctggggaagatcctccagggtgtggtg
gtggtgctgagcggcttccagaaccccttccgctcggagctccgggacaaggccctggag
ctgggggccaagtatcggccagactggactccagacagcacccacctcatctgcgccttt
gccaacacccccaagtacagccaggtcctaggcctcggaggccgaatcgtgcggaaagag
tgggtgctggactgtcaccgcatgcggcggcggctaccctctcggaggtacctcatggct
gggccagactcgagcagtgaggacgaggggggctctcacggcggcagcagtggggatgaa
gcccccaagcctccccgaaagcgcccccagaccaaagccaagccctctcaggcagcagga
cctagctcaccccagagacccccaaccccagaagagaccaaaccaccctcaccagggccc
caggaagatactgacaccaagggggagcagtcagaaggacaggacaatggggcagaagat
tctggggacaccgaggatgagctgagaagggtggctgagcggaaggaacaaaggccgccc
tctggcgaggagaacggcaaggacccgtacgcaggatccacggatgagaacacggacagt
gaaggtcctccggagtctcccaatctgccgattcccgagctcccaggtgggaaatcctcc
ctcctgatgtgggatttggccctgttacttctctgccatgacttgccccagcccgtcctg
ggatggctgctgccccctgtgacttgtcttccaggctcctcacccccagtccctagcctt
tgccacctccttgtcctcttaggcctgttcccttcctttcagcatcctctcctgacttcc
ctctctgtccctgtcctgacttctgctgtgaccgcctccatcacagcccagccccaggcg
agaccccctttggctttccactccatcaccactctgcctggactgttccactga

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