Physeter macrocephalus (sperm whale): 102996694
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Entry
102996694 CDS
T06011
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03022
Basal transcription factors
pcad05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102996694 (TAF4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
102996694 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcad03021
]
102996694 (TAF4)
03036 Chromosome and associated proteins [BR:
pcad03036
]
102996694 (TAF4)
Transcription machinery [BR:
pcad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
102996694 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
102996694 (TAF4)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
102996694 (TAF4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
102996694
NCBI-ProteinID:
XP_023984282
Ensembl:
ENSPCTG00005015206
UniProt:
A0A2Y9T3X6
LinkDB
All DBs
Position
14:1656252..1729477
Genome browser
AA seq
1039 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRAPEAAAAPEPPPAG
RARRGLSAGGRRPGPRPHCATPLVPTGPAAKLSALEAGASAAAGAGAGAGAAAGACAPGA
AAAPEPAAKPAARNGPPGGPGAAQTLNGSAALGNSLRASAAPAVSLLHNGPAPAPPPPKP
AAATVIQTPPFLGAPPAPRAPSPPAPTAPPAPPAPAAAAXXXXXXXXXXAASLARPPGPP
AGPPVAAQNGGSAAPAPAPAPAPAPASAPAPVSAPAPAANSQPGPAAVPAQVAKADSPKT
ALQPAPPPPQTLAASCPAGAGAGMILGPTMQGALPAAAAAGLPPPAPGTPTGLPKGSASA
VTQSLPRTPSATTGGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLM
IPQQALAQMQAQAHAQAQPQTAMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTIIK
QVSQAQTTVQPSTALQRSPGVQPQLVLGGAAQTPSLGTATAVQTGTPQRTVPGATTTSTA
ATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQNLLDGKIEAEDFTSRLYREL
NSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQPPPASQATTALTAVVLSGSVQRTA
GKTAATVTSALQPPVISLAQPTPVGVGKQGQPAPLVIQPPPKPGALIRPPQVTLTQTPMV
ALRQPHNRIVLTTPQQIQLNQLQPVPVVKPAVLPGTKALSTVSAQAAAAQKNKLKEPGGG
SFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLLPAPLQRRILEIG
KKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKNFSYKDDDRYEQASDVRAQLKF
FEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQRDANL
TALAAIGPRKKRKVDSPGPGPGAEGSGPGSAVPGSSGVGTPRQFTRQRITRVNLRDLIFC
LENERETSHSLLLYKAFLK
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttcttcaacagcgaggtggacgagaaa
gtggtgagcgacctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccccgcgcgcccgaggcggcagcggcgccggagccgccccccgcaggt
agagcgcggcgcggcctgagcgcgggcggccgccggccgggcccgcgtcctcactgcgct
accccgcttgtccccacagggcccgccgcgaagctgagcgctctcgaggccggcgcgagc
gccgcggccggcgccggggccggggcgggcgccgcggccggggcctgtgcgccgggggca
gcggccgcgcccgagcccgccgccaagcccgccgcccgcaacggcccgcccggcggcccc
ggcgccgcgcaaactttgaatgggagcgccgcgttggggaactcgctccgcgcctccgcc
gcacctgctgtcagcctgctccacaacgggcccgcgcccgcgccgccgccgcccaagccc
gccgccgccactgtcatccagacgccgcccttcctcggcgccccccccgcgccccgcgcc
ccctcgccccccgcgcccaccgccccccccgcgccccccgcgcccgccgccgctgccnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnngccgccagcctggcccggccgcccggccccccg
gccggacccccggtggccgcgcagaacgggggcagcgccgcgcccgcccccgcgcccgcc
cccgcccccgcgcccgcctcggccccagcgcccgtttctgccccggcgcccgccgccaac
agtcagcccgggcccgccgccgtgcccgcgcaggtggccaaggccgactcgcccaagacc
gcgctgcagccggcgcccccgccgccgcagaccctggcggccagctgcccggccggcgcg
ggggccggcatgatcctcgggccaactatgcaaggggctctgcccgccgccgccgccgcc
ggcctcccaccgccggcccccggtactcccactgggctgcccaagggctcggccagcgcg
gtgacccagagcttgcccaggacgccctcggccaccaccggcgggatccgggccacgctg
acgcccacggtcctcgccccacgcctgccgcagccgccgcagaacccgaccaacatccag
aacttccagctgcccccaggtatggtcctcgtgcggagcgagaacgggcagctgttaatg
attcctcagcaggccctggcccagatgcaggcccaggcccacgcccaggcccagcctcag
acggccatggcgccccgcccggccacgcccacaagtgcccctcccgtgcagatctccacc
gtgcaggctcctgggacccccattattgcacggcaggtgaccccaacgaccataatcaag
caagtgtctcaggcccagacgacggtacagcccagcaccgcgctgcagcgctctcccggg
gttcagcctcagcttgttctgggtggcgctgcccagacaccctcactggggacggcgaca
gctgttcagacggggacacctcagcgaacggtcccgggggccaccaccacctccacagcc
gccacggaaactatggagaacgtgaagaaatgtaaaaattttttatctacgctaataaaa
ctggcttcatctggtaaacagtctacagagacagccgctaacgtgaaagaactggtacag
aatctgctggacggaaaaatcgaagcagaagatttcactagtaggttataccgagaactt
aattcttcacctcaaccttaccttgtgcctttcctgaagaggagcttgcccgccttgaga
cagctgacccccgactccgcggccttcatccagcagagtcagcagcagccgccgccggcc
tcgcaggccaccaccgcgctcacggccgtggtgctcagcggctcggtgcagcgcacggcc
gggaagacggcggccaccgtgaccagcgccctgcagccccccgtcatcagcctcgcgcag
cccacgccggtgggcgtcggcaagcaggggcagcccgcgccgctggtgatccagccaccg
cccaagcctggagcgctgatccggccgccgcaggtgacgctgacgcagacgcccatggtg
gcgctccggcagccccacaaccgcatcgtgctcaccacaccccagcagatccagctgaac
cagctgcagccggtccctgtggtgaaacctgccgtgttacctggaaccaaagctctttct
actgtctcggcacaagcagctgctgcccagaaaaacaagctcaaggagcctgggggaggc
tcgtttagggacgacgatgacatcaatgacgtagcgtcgatggccggcgtgaacctgtcg
gaagaaagtgcgagaatattggctacgaactctgagttagtgggcaccctgacgcggtcc
tgcaaagacgagaccttcctcctcccagcgcctctgcaaagaagaatattagaaataggt
aagaaacatggcataacagagttacacccagacgtggtgagttacgtgtcacacgccacg
caacagaggctgcagaaccttgtagaaaagatatcagaaacggctcagcaaaagaacttc
tcttataaggacgatgacagatacgagcaggcaagtgacgtccgggctcagctcaaattt
tttgaacagctcgatcaaattgagaagcagagaaaggacgaacaggagagagagatcctg
atgcgggcagcgaagtctcgatccagacaagaagatccagaacagttaaggttgaaacag
aaggcaaaggagatgcagcaacaagaactggcacagatgaggcagcgagacgccaacctc
acagcactagctgccatcgggcccaggaaaaagaggaaagtggactctccgggaccggga
ccgggagcagagggctcgggcccaggctcagcggtcccaggcagttccggcgtcggaacc
cccagacagttcacgcgacaaaggatcacgcgggtcaacctcagggacctcatattttgt
ttagaaaatgaacgtgagacaagccattcactgttgctctacaaagcattccttaagtag
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integrated database retrieval system
