Physeter macrocephalus (sperm whale): 102996872
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Entry
102996872 CDS
T06011
Symbol
SARS2
Name
(RefSeq) serine--tRNA ligase, mitochondrial isoform X1
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102996872 (SARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcad01007
]
102996872 (SARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcad03016
]
102996872 (SARS2)
Enzymes [BR:
pcad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
102996872 (SARS2)
Amino acid related enzymes [BR:
pcad01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
102996872 (SARS2)
Transfer RNA biogenesis [BR:
pcad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102996872 (SARS2)
Prokaryotic type
102996872 (SARS2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
102996872
NCBI-ProteinID:
XP_007114645
Ensembl:
ENSPCTG00005009065
UniProt:
A0A2Y9F432
LinkDB
All DBs
Position
17:11608904..11618615
Genome browser
AA seq
518 aa
AA seq
DB search
MAASVVRRLWPLVAARGLRLRGGCVCNQRPRRSFATERRDRNLLYEHAREGYSALPQLDM
EPLCACPEEAARALELRKGELRSEDLPAIISAWQGLRQLREHIRSLEEEKGAVAEAVRAL
LVNQDSNHVQQDPQYQSLRARGREIRKQLMLLYPKEAQLEEQFYLRALRLPNQTHPDVPV
GDESQARVLHVVGDKPAFSFQPRGHLEIAEKLDIIRQKRLSHVSGHRSYYLRGAGALLQH
GLVNFTLNKLIHRGFTPMTVPDLLRGAVFEGCGMTPNAKPSQIYNIDPSRFADLNLAGTA
EVGLAGYFMDHSVAFRDLPIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPG
LEQSSQLLEEFLSLQMEILTELGLHFRVLDMPTQELGLPAYRKFDIEAWMPGRGLFGEVT
SASNCTDFQSRRLHIMVQTEAGELQFAHTVNATACAVPRLLIALLESNQQKDGSVLVPPV
LQPYLSTDRITTPTHVPLQYIGPNQPQKPRLPGQPASS
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtccgtagtgcggcgcttgtggcctctggtggctgctcggggcctgcggctc
cggggaggctgcgtttgcaaccagagaccaaggagaagtttcgctacggagagacgagac
cggaacctcctgtacgagcacgcgcgtgagggttacagcgcgctccctcagctggacatg
gagccgctgtgcgcatgcccggaagaggccgcgcgcgccctggagctccgcaagggggag
ctgcggtcggaggatctgcccgcgatcatctcggcatggcagggtttgaggcagctgcgg
gagcacatccggagcctggaggaggagaagggggccgtggctgaggcagtgcgggccctg
ctggtaaaccaggatagcaatcacgtgcagcaggacccccaatatcagagtctgcgggca
cgtggccgggagatccggaagcagctcatgctcctgtaccccaaggaggcccagctcgag
gagcagttctacctgcgggcgctgaggctgcccaaccagacccacccagacgtgcccgtc
ggggacgaaagccaggcccgagtgctccatgtggttggagacaagccagctttctccttc
caaccccggggccacctggaaatagctgagaaactcgacatcatccgtcagaagcgtctg
tcccacgtgtctggccaccgctcctattacctgcgcggggctggggccctcctgcagcac
ggcctggtcaacttcacgctcaacaagctcatccaccggggcttcacccccatgacggtg
ccagaccttctccgaggagctgtgtttgaaggctgtgggatgacaccaaatgccaaacca
tcccaaatttacaacatcgacccctcccgctttgcagacctcaacctggccgggacagca
gaggtcggacttgcaggctacttcatggaccactccgtggccttcagggacctgccaatc
aggatggtttgttccagcacctgctaccgggcggaaacagacacggggaaggagccgtgg
gggctgtatcgagtgcaccacttcaccaaggtggagatgtttggggtgacaggccctggg
ctggagcagagctcgcagctgctggaggagttcctgtcccttcagatggagatcttgaca
gagctgggcttgcacttccgggtcctggacatgcccacgcaggagctgggcctgcccgcc
taccgcaagtttgacatcgaggcctggatgccgggccgaggcctctttggcgaggtcacc
agtgcttccaactgcacggacttccagagccgccgcctccacatcatggtccagacggag
gccggggagctgcagttcgcccacacggtgaacgccacggcctgtgctgtcccccgcctc
ctcattgccctcctggagagcaatcagcaaaaggacggctcggtgctcgtgccccctgtc
ctccagccctacctcagcaccgatcggatcacgacccccacccacgtgcctctccagtac
atcggccccaaccagccccagaagcccaggctcccgggccagcctgcctcgagctga
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