Physeter macrocephalus (sperm whale): 102996897
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Entry
102996897 CDS
T06011
Symbol
TDRD12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pcad
Physeter macrocephalus (sperm whale)
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcad03036
]
102996897 (TDRD12)
Enzymes [BR:
pcad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
102996897 (TDRD12)
Chromosome and associated proteins [BR:
pcad03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102996897 (TDRD12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
DEAD
CS
CCDC32
Motif
Other DBs
NCBI-GeneID:
102996897
NCBI-ProteinID:
XP_028333681
Ensembl:
ENSPCTG00005015644
UniProt:
A0A455AP56
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All DBs
Position
17:complement(14971726..15052294)
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AA seq
1280 aa
AA seq
DB search
MLQVLVLKIEDPGCFWVIIKGCSPFLDHEVDYQKLNSAMNDFYNSMCQDIEIKPLMLEEG
QVCVVYCQELKCWCRAVIKSIVSSADHYLTECFLVDFAKYIPVKSKNIRVAVETFMQLPY
RAKKFRLYCTKPVTLHIDFCEDSTEIVPAKKWDSAAVRYFQNTVKAATQVEAKLCAVEED
TFEVYLYVTTKSEKVCVNDDLVAKNFACYVSPTENKNLDSLEKPRLNIKSESFSGKLNPA
LTLWPMFLQGKDSQRMEKSSGLTVLAKPLQHPWPKGVGDLGPTARILDTAIKCNMDSLRD
SPPKKSEKKQQCISLKDVNKCVESSVYWPMKRGITMYADPDIPAASALCQKSNEKPLRLA
EKKEYNEKNGCVKLLQFLNPDPLRADGISDLQQLQKLKSGSRLPLVVLRTRVEPCLSINT
APLSADLKKALRRNKIPGPSHTESYSWPPIARGCDVVVISHCGNDPLLYLPPLLTILQTG
GCYKSLPSRNGPLAVIVCPGWKKAQLIFELLGDYSMFSRPVHPVVLTIGLHKDEAKNMKL
PRGCNVIVTTPHSLLRLLKYQSLLFLRLCHLVLDEVEVLFSEANEQIFPILDNFKKNIEV
EERESAPHQIVAVGVHWNRHIEQLIKEFMNDPYVVITAMEEAALYGSVQQVVHLCLECEK
TSTLLQTLDFVPSQAQKTLIFTGSVAETDTVCKVVESSSIFCLKMHKEMIFNLKSVSEQW
KKKLSSGSHIVLALTDDCIPLLAITDATCVIHFSFPSSPKIFGGRLYCMSDRFQSLTEQG
SPAEQGDKKTKSVLLLTERNACHAVGVLRYLERADSKIPSELYEFTAGVLEAKEDKKARR
PLCPYLKAFGFCKDQRICPDRHHVNPEVDMPRKLSNQTLPVFGYIKIIPFYVLNATNYFG
RIVDKHVDLYATLTAEMKEYFEDSSNKTTVEKVEKFGLYGLAEKVVFHRVQVLEMSQKED
TWALDKVLVKFVDEGRTELITRGQLLHLPESFHTLPPQAVEFIVCRVKPADNEMEWNPKV
TRYIHHKINGKLHDAKVTLALGNTVWIDPMVHVTKLSNLKTSVIDYNVRAEILSMGMGID
NSEHVEQLKKLYKGAKMPTFEESVSQTPMPSSTEDDACLQSTHQEDKGSERGADSQTNSE
NPTHETLPENTGDASINKTTEPLKSFHPQIKWFQKEDVVILKIRIRNVKDYKCKYFRDRV
VFSAWVGEKFYLADLELQANIIKDDCKCIVKNDEPIITLSKEKKESWCGLLRQRNPNVAF
DFDHWEECDEDKEDSHFSRL
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggtcctggtgctgaagatcgaagatccaggttgcttctgggttattataaaa
ggatgtagtccctttttagatcatgaagttgactatcaaaaactaaatagtgccatgaat
gacttctataatagcatgtgtcaagatatagaaataaaaccactaatgttggaagaaggg
caggtttgtgtggtttattgtcaggaactgaagtgctggtgcagggctgtaattaagtca
atagtgtcttcagcagaccattacctcacagagtgtttccttgtggattttgccaagtac
attccagtgaaatccaaaaacatccgagttgcagtagaaacttttatgcagcttccctac
agagcaaaaaaattcagactgtactgcacaaaacctgtcacattgcacattgacttctgt
gaagacagcactgagattgtacctgccaagaagtgggacagtgcagctgttcggtacttt
cagaataccgtaaaagcagctacccaggtggaagccaaattgtgtgctgtggaagaagat
acttttgaggtttacctttatgtaactacaaaaagtgaaaaggtctgtgttaacgatgat
ctggttgcaaagaacttcgcttgttatgtatcacccacggagaataaaaaccttgattct
ttagagaaaccaagattgaatattaagtcagaatccttttccggtaaactcaatccagca
cttactctttggccaatgtttttgcaaggaaaagattctcaaaggatggaaaagtcaagt
ggtttaactgttctggcaaagcctctccagcatccgtggcccaagggtgtcggtgatctc
gggccaaccgctaggatcctcgatacagctataaagtgtaatatggattcattgagagat
tcaccccccaaaaaatcagaaaagaaacaacagtgcatctccttaaaagatgtaaataag
tgtgttgagtcttcagtgtattggccgatgaaaagaggcataaccatgtatgccgatcca
gatataccagcagcaagtgctttatgtcagaagtcaaatgagaaaccacttagattggct
gagaagaaagaatacaatgagaagaacggctgtgtgaaattattgcagtttctaaatccg
gatcctttgagagccgatggaatctctgatctgcagcagttgcagaagctgaagtcgggc
tcccggctgcccttggtcgttctgcggaccagggtcgagccctgcttgtccatcaacacg
gcgccactctcggcagacctgaaaaaggctcttcgaagaaataagattccgggccccagc
cacaccgaatcttactcttggcctcccatagcacgtggctgtgacgtggtggtcatttct
cattgtggaaatgaccctttgttgtaccttccaccactgcttacgattttgcaaacaggg
ggctgctacaagtcattaccaagtagaaatggacctctggcagtcatcgtatgccctggg
tggaaaaaggcccaattaatttttgaattattgggagactatagcatgttctccaggcct
gttcatcctgtggtattaacaattggactccacaaagatgaagccaaaaatatgaagctt
ccaagggggtgcaatgtaattgttacaacaccacatagcctcctgagacttctcaaatat
caaagcttgttatttcttagactctgtcacctggttttggatgaggtggaagtattattc
tctgaagctaatgaacaaatatttcctatattagataactttaaaaaaaatattgaagtt
gaagaaagagaatctgccccacatcagattgttgcagttggagttcattggaacagacat
atagagcagttaatcaaagagttcatgaacgacccctacgttgtgatcacagccatggag
gaggcggccctctatggcagcgtccaacaggtagtacatctttgcctggaatgtgaaaag
acctccactttactccaaactcttgatttcgttccaagtcaggcacaaaagaccttgatc
ttcaccggttctgtagctgaaacagatacagtgtgtaaggtagtagaaagcagttccata
ttttgcttgaaaatgcataaagaaatgatttttaatttaaaaagtgtttcagaacagtgg
aagaagaagttaagttctggttctcacattgtattagccttaacagatgattgcatacca
ctcttggccatcaccgatgccacgtgtgtgattcacttcagctttccttcctcgccaaaa
atttttggtggacgcctgtattgcatgtctgatcgttttcagagtttaactgaacagggt
tctcctgcagaacagggagataaaaaaaccaaatctgtattgctgctgacggagagaaat
gcctgccatgcagttggtgtcctgcgctacttggagcgggcagatagcaagattccttca
gagctgtacgagtttactgcaggggttctggaagccaaagaagataaaaaagccagaagg
cctctttgtccgtatcttaaggcttttggtttttgcaaagaccaaaggatctgtcctgat
cgacaccatgttaatccagaagtagacatgccaaggaagttgtccaaccaaactctacca
gtgtttggatacataaaaataatacccttttatgttttgaatgcaacaaattactttggt
cgtatagttgataaacatgtggatctttatgcaactcttactgctgaaatgaaagagtat
tttgaagattccagtaataaaacaactgttgaaaaggtggagaaatttggattatatgga
ttagcagaaaaagtagtttttcacagggttcaggtgttggagatgagccagaaggaggac
acgtgggccctggataaggtcctcgtgaagttcgtagatgaaggcaggaccgaactcatc
acaagaggccagttgcttcacctcccagaaagtttccacactctgcccccgcaagctgtg
gagtttatcgtttgtagagtgaaacccgcggacaatgaaatggaatggaatccaaaggtt
actaggtacattcatcataaaattaatgggaaactgcatgatgcaaaagtgacgttggct
ttgggaaatacggtttggattgatccaatggtgcacgttacaaaactttcaaacttgaaa
acttctgtcattgattataatgttcgagctgaaattttgtcaatgggaatgggcattgat
aactcagaacatgtagaacaactgaaaaaattatacaaaggagctaaaatgccaactttt
gaagaaagcgtaagccagaccccgatgccttcttccacagaagatgatgcttgtctgcag
agcacacatcaagaggacaagggctcagagagaggtgctgactcccagacaaactcagaa
aacccaacacatgaaactttacctgagaacactggagatgcttccattaacaaaactaca
gagcctctgaaaagcttccacccacaaataaaatggttccaaaaagaggatgtggtcata
ttgaagataagaataaggaatgtaaaagattacaaatgtaaatactttagagatagagtt
gttttcagtgcctgggtgggagagaaattttacttggctgatttggagctgcaggccaac
ataataaaagatgattgcaaatgcatagtgaaaaatgatgaaccaataatcactctttcg
aaagagaaaaaggagtcttggtgtggcttactcagacagaggaatcctaacgtggctttt
gattttgatcactgggaagaatgtgacgaggataaggaggatagccacttctccaggctg
taa
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