Physeter macrocephalus (sperm whale): 102996900
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Entry
102996900 CDS
T06011
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04270
Vascular smooth muscle contraction
pcad04360
Axon guidance
pcad04611
Platelet activation
pcad04625
C-type lectin receptor signaling pathway
pcad04810
Regulation of actin cytoskeleton
pcad05135
Yersinia infection
pcad05152
Tuberculosis
pcad05163
Human cytomegalovirus infection
pcad05200
Pathways in cancer
pcad05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102996900 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
102996900 (ARHGEF12)
04625 C-type lectin receptor signaling pathway
102996900 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
102996900 (ARHGEF12)
09158 Development and regeneration
04360 Axon guidance
102996900 (ARHGEF12)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102996900 (ARHGEF12)
05205 Proteoglycans in cancer
102996900 (ARHGEF12)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
102996900 (ARHGEF12)
09171 Infectious disease: bacterial
05135 Yersinia infection
102996900 (ARHGEF12)
05152 Tuberculosis
102996900 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102996900 (ARHGEF12)
Membrane trafficking [BR:
pcad04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102996900 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
Motif
Other DBs
NCBI-GeneID:
102996900
NCBI-ProteinID:
XP_007121768
Ensembl:
ENSPCTG00005021172
UniProt:
A0A2Y9FFQ8
LinkDB
All DBs
Position
16:complement(12340579..12490617)
Genome browser
AA seq
1544 aa
AA seq
DB search
MSGTQSTITDRFPLKKPIRHGSILNRESPTDKKQKVERSTSHDFDPTDSSSKKTKSSSEE
SRSEIYGLVHRCVIIQKDDNGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNGT
LVTHSNHLEVVKLIRSGSYVALTVQGRPPGSPQFPLADSEVEPSVVGHMSPIMTSPHSPG
ASGNMERITSPVLMGEENNVVHNQKVEILRKMLQKEQERLQLLQEDYSRTPAQRLLKEIQ
EAKKHIPQLQEQLSKATGSAQDGAAVTSSKPLGDGLAVSEIEADPGDGLGRIDYGSGDAS
RPGSDSADSPKSGLKERIYLEENPDKSEVIQDADTQSLIGSPSTRIAPHIIGAEDDDFGT
EHEQINGQCSCFQSIELLKSRPAHLAVFLHHVVSQFDPATLLCYLYSDLYKQTNSKETRR
VFLEFHQFFLDRSAHLKVSVPDEISVDLEKRRPELIPEDLHRHYIQTMQERVHPEVQRHL
EDFRQKRSMGLTLAESELTKIDAERDKDRVTLEKERACAEQIVAKIEEVLMTAQAVEEDK
SSTMQYVILMYMKHLGVKVKEPRNLEHKRGRIGFLPKIKQSMKKDREGEEKGKRRGFPSI
LGPPRRPSRHDNSAIGRAMELQKQRHPKHISTPSSVSPEPQDSAKLRQSGLASEGADIGY
LPANSMSSMVSGATLSQEGGKENDMGSKQVGETPASGDSLDGTPRTPSTIFDFPPPPLDQ
VQEEEWEVERVTEHGTPKPFRKFDSIAFGESQSEDEQFENDLETDPPNWQQLVSREVLLA
LKPCEIKRQEVINELFYTERAHVRTLKVLDQVFYQRVSREGILSPSELRKIFSNLEDILQ
LHIGLNEQMKAVRKRNETSVIDQIGEDLLTWFSGPGEEKLKHAAATFCSNQPFALEMIKS
RQKKDSRFQTFVQDAESNPLCRRLQLKDIIPTQMQRLTKYPLLLDNIAKYTEWPTEREKV
KKAADHCRQILNYVNQAVKEAENKQRLEDYQRRLDTSNLKLSEYPNVEELRNLDLTKRKM
IHEGPLVWKVNRDKTIDLYTLLLEDILVLLQKQDDRLVLRCHSKILASTGDSKHTFSPVI
KLNTVLVRQVATDNKALFVISMSDNGAQIYELVAQTVSEKTVWQDLICRMAASVKEQSTK
PIPLPQSPPCEGDNDEEEPPKLKVEHHGISVTGLQSPDRDLGLESPLMSSKPQSHSLDTS
GKSEVDDLFVAERQFAKEQHADGTLKEVGVNYQITIPDPHLPVSEERWALDALRNLGLLK
QLLVQQLGLTEKSTQEDWPHFPRCRTASLGLQADSGTQNPENIKAYHPCEGQMPFRTGTG
DISTCYSPRTSTESSAPRDSVVLAFQDSQASNILVMDHMIMTPEMPPAEPEGGLDESGEH
FFDAREAHSDDNPSEGDGAVKKEEKDVNLRISGTCLILDGYETVQESSTDEEVASSLPPQ
PATGIPSMDSTPRQQRSPQNAHFDGAVSPFTPEFLVQQRWGAMEDSCFEIRSPSSCADSQ
SQIMEYIRKIEADLEHLKKVEESYTILCQRLAGSALTDKHSDKS
NT seq
4635 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtctactatcaccgacaggtttcccctcaaaaaacctataaggcat
ggaagtattttgaaccgagagtcaccaacagataagaagcagaaagttgagcgcagtaca
tcacatgattttgaccccacagatagctcctccaagaagacaaagtctagttcagaggag
agtagatccgagatatatggtcttgttcaccgttgtgtgatcatccagaaggatgacaat
ggatttgggctgacggtcagtggagacaatccagtgtttgtacagtctgtcaaagaagat
ggagcagccatgcgggctggcgtacagacaggtgatcgaatcatcaaggtgaatggaact
ctggtgactcattcaaaccatttggaagtggtgaagctaatcagatcgggttcctatgta
gctctcactgttcagggacgcccacctgggtcgccccagtttccacttgctgattctgaa
gtagagccatcagtcgttggacatatgtctcccatcatgacatcccctcattcacctgga
gcatctgggaatatggagagaattactagtcctgtgctcatgggggaggaaaacaatgtg
gttcataaccagaaagtagaaattctgagaaaaatgttacagaaagaacaggaacggcta
cagttattgcaggaagattacagccgaacacctgcccaaagattgctaaaagagatccaa
gaggccaagaaacacattcctcaactgcaagagcagttatccaaagccacaggctctgct
caggatggagctgcagttacatcctccaagccattaggcgatgggctagcagtcagtgaa
atagaagcagatcctggtgatggactaggcagaattgactatggcagtggagatgcttct
cggcccggtagtgacagtgcagatagtcccaagagtggcctgaaagagaggatttatcta
gaggaaaacccagacaaaagtgaagtaattcaggacgctgacactcagtcacttattggg
agtccctctacccgtatagcacctcatattattggagcagaggatgatgactttggtact
gaacatgaacagatcaatgggcagtgcagctgtttccagagcattgaactgctaaaatct
cgccctgctcacttggctgttttcttacaccatgtagtttcacagtttgaccctgcaaca
ttgctctgttatctctattcagacctgtataaacagaccaattccaaggagactcgtcgt
gtcttccttgagtttcatcagttcttcctggatcgatctgcacacctgaaagtttctgtt
cctgatgaaatatcagtagatctagaaaaaagaagacccgagcttattcctgaggatcta
catcgccactatatccaaactatgcaagaaagagtccacccagaagttcaaaggcacttg
gaagattttcgacagaaacgtagcatggggctgaccttggctgaaagcgaactgactaaa
attgatgcagagagagacaaggaccgggtaactttggagaaggaacgggcatgtgcagag
cagattgttgccaaaattgaagaagtgttgatgactgctcaggctgtagaagaagataag
agttcaacaatgcaatatgttattctcatgtacatgaagcatttgggagtaaaagtgaaa
gaacctcgaaatttggagcacaagcgaggtcggatcggattccttccaaaaatcaagcaa
agtatgaagaaagatagggaaggcgaagaaaaagggaagagaagaggattccccagcatc
ttgggacccccaaggagaccaagccgtcatgacaacagtgcaattggcagagccatggaa
ctacagaagcagcgccaccctaagcacatatccacaccctcatctgtaagtcctgaacct
caggactctgctaagttgcgccagagtggattagcaagtgaaggagcagacattggatac
ctgccagccaattccatgtcctccatggtttcaggggccactctttcccaggaaggaggg
aaagagaatgatatgggatcaaagcaagttggagaaacgccagcatctggagactcctta
gatggcacacctcgtactcccagtaccatatttgacttcccacctcctccattagaccaa
gtgcaggaggaggaatgggaagtggaaagggtgactgaacatgggacaccaaagcccttt
cgaaagtttgacagcatagcttttggagaaagtcaaagtgaggatgaacagtttgaaaat
gacttagagacagatccacccaactggcaacagctcgttagtcgagaagtgttattggca
ctaaagccttgtgagatcaaaagacaggaagtaattaatgaattgttctacactgaaaga
gctcatgttcgaacactgaaggttctagatcaagtgttctatcagcgagtttccagagaa
ggaattctgtcaccttcagaactacggaaaattttttcaaacttagaagatattcttcaa
cttcacattgggttgaatgagcaaatgaaggctgttcgaaagaggaatgagacatctgtt
attgatcagattggggaagatttgctgacttggttcagtggacccggggaggaaaagttg
aaacatgctgctgctaccttttgcagtaaccaaccctttgccctggaaatgatcaagtct
cgtcagaaaaaggattctcgattccagacttttgtgcaagatgctgagagtaatccactg
tgtcgtcgtctgcagctgaaagatatcattcccacccaaatgcagaggcttactaagtac
cctcttctattggataatattgccaaatacacagagtggccaacagaaagggagaaggtg
aagaaagctgcagatcactgtcgtcagatcttaaattatgtaaatcaggctgttaaggag
gcagaaaacaagcagcgcttagaagattatcagcgtcgccttgatacctccaatctgaag
ttgtcagagtacccaaatgttgaagagctcaggaatttggatttaacaaaaaggaagatg
attcatgaagggccattggtttggaaggtgaatagagataaaactattgatctatacact
ttgctgctggaagatattcttgtattgttacaaaagcaggacgatagactggtgttaagg
tgtcatagtaagattctggcatctacaggtgatagcaaacacacatttagccctgtcatc
aagttgaatacagtgttggttcgacaagtggcaacagataacaaagctttattcgtcatc
tccatgtctgacaatggagcccaaatttatgaactggtggcacagacagtttctgaaaag
actgtctggcaggacctaatctgtcggatggctgcatcagtgaaggagcagtccacaaag
ccaattccactgccacagtcaccaccttgcgaaggagacaatgatgaagaagaacctcca
aaattaaaagtggaacatcatggcatttcagtcactggtctgcagagtccagacagagat
ttgggattagagtctcctttaatgtcgtcaaaacctcaatctcattcactggatacctct
gggaaatcggaggtggatgatctctttgtggctgagcgacagtttgcaaaggagcagcat
gcagatggaactctaaaggaagttggagtcaattatcaaatcacaatcccagatccacac
ttgcctgtctcagaagaacggtgggcgttggatgcactaaggaatttgggtttgttgaag
cagttgctggtacaacagctgggtttgaccgagaagagcactcaggaagactggccacat
ttcccaagatgcaggacagcctctctggggctgcaggcagacagtggaacccagaaccct
gaaaatattaaggcctatcatccttgtgaaggacagatgccctttagaactggaactggt
gacatttcaacttgttacagtccacggacttcaactgaatcttctgctccacgggattca
gtggtactggcattccaagatagccaggcaagtaacattttagtaatggaccacatgatt
atgaccccagagatgcctcccgcagagccagaagggggtcttgatgagagtggagagcac
ttttttgatgcccgtgaagcacatagtgatgataatccatcagaaggtgatggagcagtt
aaaaaggaagagaaggatgttaatttgcgcatctcaggaacctgtttgatccttgatggc
tatgaaacagtgcaggagagctccacggatgaggaggttgcttcctcgcttcccccgcag
cctgcaacaggcatcccctctatggactctaccccccggcagcagcgttctccccagaat
gctcattttgatggggcagtttcacctttcaccccagaattcctggtccagcagcgctgg
ggagctatggaggattcctgttttgagatccggagtccctcctcttgtgcagattcacaa
agccagatcatggagtacattcgtaagatagaggctgaccttgaacacttaaagaaggtg
gaggaaagttacaccattctttgccaaaggctggctggatcagccctcacagacaagcac
tcagataaaagttag
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integrated database retrieval system
