Physeter macrocephalus (sperm whale): 102996936
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Entry
102996936 CDS
T06011
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102996936 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
102996936 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcad04147
]
102996936 (VPS36)
Membrane trafficking [BR:
pcad04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
102996936 (VPS36)
Exosome [BR:
pcad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
102996936 (VPS36)
Exosomal proteins of colorectal cancer cells
102996936 (VPS36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
MA3
BBL5
Motif
Other DBs
NCBI-GeneID:
102996936
NCBI-ProteinID:
XP_023981727
Ensembl:
ENSPCTG00005014377
UniProt:
A0A2Y9SWH7
LinkDB
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Position
13:complement(16316696..16350469)
Genome browser
AA seq
386 aa
AA seq
DB search
MDRFVWTSGLLEINETLVIQQRGVRIYDGEEKIKFDAGTLLLSTHRLIWRDQKNHECCMA
IPLSQIVFIEEQAAGIGKSAKIVVHLHPAPSNKEPGPFQSSKNSYIKLSFKEHGQIEFYR
RLSEEMTQRRWENMPVSQSLQANRGPQPGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMVKAKEMVELSKSIANKIKDKQGDITEDETIRFKSYLLSMGIANPVTRETYGSATQ
YHMQLAKQLAGILQAPLEERGGIMSLTEVYCLVNRARGMELLSPEDLVNACKMLEELKLP
LRLRVFDSGVMVIELQSHKEEETVASALETVSEKGSLTSEEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFMTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcttcgtgtggaccagcggcctcctggagatcaacgagaccctggtgatccag
cagcggggagtgcgcatctacgacggcgaggagaagataaaatttgatgctggtaccctc
cttcttagtacgcaccgtctaatttggagagatcagaaaaatcatgaatgctgcatggcc
attcctctttcccaaattgtgttcattgaagaacaggcagctggaattgggaaaagtgcc
aaaatagtggttcatcttcacccagctccttctaacaaagaacctggcccattccagagc
agtaagaactcctacatcaagctgtccttcaaagaacacggccagattgagttttacagg
cgtttatcagaggaaatgacacagagaagatgggagaatatgccagtttcccagtcgttg
caagcaaatagaggaccccagccaggaagaataagggctgtaggaattgtaggtattgaa
aggaaactggaagaaaaaagaaaagaaactgacaaaaacatttctgaggccttcgaagac
ctcagcaagctaatggtcaaggctaaggaaatggtggagttatcaaaatccattgctaat
aagattaaagacaagcaaggtgacatcacagaagatgagaccatcaggtttaaatcctat
ttgctgagcatgggaatagctaacccggttaccagggagacctacggctcggccacacag
taccacatgcagctggccaaacagctggctggaatattgcaggcgcctttggaggaacga
gggggaataatgtcactcacggaggtgtactgtttagtaaaccgagcccgaggaatggaa
ttgctctcaccagaagatttagtgaatgcatgcaagatgctggaagagctgaaattacct
ctcaggctccgtgtgtttgacagcggcgtcatggtaattgaacttcagtcccacaaggag
gaggaaacagtggcctcagccttggagacggtttcagaaaagggatctctaacatcagaa
gagtttgctaagcttgtgggaatgtctgtcctcctggctaaagaaaggttgcttcttgcc
gagaagatgggccatctttgccgagatgactccgtggaaggcttgcggttttacccaaat
ttatttatgacacagagctaa
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