Physeter macrocephalus (sperm whale): 112065208
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Entry
112065208 CDS
T06011
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112065208 (EXOSC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcad03019
]
112065208 (EXOSC6)
Messenger RNA biogenesis [BR:
pcad03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
112065208 (EXOSC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
112065208
NCBI-ProteinID:
XP_023980794
Ensembl:
ENSPCTG00005011344
UniProt:
A0A2Y9SYD2
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Position
17:43244901..43246259
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AA seq
272 aa
AA seq
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MPGDNRRIRGPEESQPPQLYATDEDEVPAARDPTRLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRQVEGGERGGGPAGAGGETPAALRGRLLCDFRRAPFSGRRRRAPPGGSEER
ELALALQEALEPAVRLGRYPRAQIEVSALLLEDGGSALAAALTAAAIALADAGIEMYDLV
VGCGLSRAPGPEPTWLLDPTLLEEERAAAGLTVALMPVLNQVAGLLGSGEGGPTESWAEA
VRLGLEGCQRLYPVLQQCLVRAARRRGAATPP
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggacaaccgccgcattcgcgggcccgaggagtcgcagccgccgcagttgtac
gcgaccgacgaggacgaggtgccggccgctcgcgacccgacgcggctccggcctgtgtac
gcgcgcgccgggctgttgagccaggccaagggctcggcctacttggaggcgggaggcacc
aaggtgctgtgcgcggtgtccggcccacgccaggtagagggcggtgagcgcggtggcggc
ccggccggagcgggcggcgagaccccggccgcgctgcggggccgcctgctctgcgacttt
cgccgcgcgcccttctcgggccgccggcgccgcgctcccccgggtggcagcgaggagcgt
gagctggcgctggcgctgcaggaggcgctcgagccggcagtgcgcctgggccgctacccg
cgcgcgcagatcgaggtgtcggcgctgctgctcgaggacggcggctcggcgctggccgcc
gctctcacggctgccgcgatcgccctggccgacgcgggcatcgagatgtacgacttggtg
gtgggctgcggcttaagccgcgctccggggcccgagcccacctggctgctggaccccacg
ctgctagaggaggaacgcgccgccgccggcctcaccgtggcgcttatgccggtgctcaac
caggtggccgggctgctgggcagcggggagggaggcccgaccgagagctgggcggaggcc
gtgcgcctgggtctcgagggctgccagcgcctctaccccgttttgcagcagtgcttagta
cgggccgcccgccggaggggcgccgccacgccgccctga
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