KEGG   Physeter macrocephalus (sperm whale): 112065208
Entry
112065208         CDS       T06011                                 
Symbol
EXOSC6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
pcad  Physeter macrocephalus (sperm whale)
Pathway
pcad03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcad00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    112065208 (EXOSC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcad03019]
    112065208 (EXOSC6)
Messenger RNA biogenesis [BR:pcad03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     112065208 (EXOSC6)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 112065208
NCBI-ProteinID: XP_023980794
Ensembl: ENSPCTG00005011344
UniProt: A0A2Y9SYD2
LinkDB
Position
17:43244901..43246259
AA seq 272 aa
MPGDNRRIRGPEESQPPQLYATDEDEVPAARDPTRLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRQVEGGERGGGPAGAGGETPAALRGRLLCDFRRAPFSGRRRRAPPGGSEER
ELALALQEALEPAVRLGRYPRAQIEVSALLLEDGGSALAAALTAAAIALADAGIEMYDLV
VGCGLSRAPGPEPTWLLDPTLLEEERAAAGLTVALMPVLNQVAGLLGSGEGGPTESWAEA
VRLGLEGCQRLYPVLQQCLVRAARRRGAATPP
NT seq 819 nt   +upstreamnt  +downstreamnt
atgcccggggacaaccgccgcattcgcgggcccgaggagtcgcagccgccgcagttgtac
gcgaccgacgaggacgaggtgccggccgctcgcgacccgacgcggctccggcctgtgtac
gcgcgcgccgggctgttgagccaggccaagggctcggcctacttggaggcgggaggcacc
aaggtgctgtgcgcggtgtccggcccacgccaggtagagggcggtgagcgcggtggcggc
ccggccggagcgggcggcgagaccccggccgcgctgcggggccgcctgctctgcgacttt
cgccgcgcgcccttctcgggccgccggcgccgcgctcccccgggtggcagcgaggagcgt
gagctggcgctggcgctgcaggaggcgctcgagccggcagtgcgcctgggccgctacccg
cgcgcgcagatcgaggtgtcggcgctgctgctcgaggacggcggctcggcgctggccgcc
gctctcacggctgccgcgatcgccctggccgacgcgggcatcgagatgtacgacttggtg
gtgggctgcggcttaagccgcgctccggggcccgagcccacctggctgctggaccccacg
ctgctagaggaggaacgcgccgccgccggcctcaccgtggcgcttatgccggtgctcaac
caggtggccgggctgctgggcagcggggagggaggcccgaccgagagctgggcggaggcc
gtgcgcctgggtctcgagggctgccagcgcctctaccccgttttgcagcagtgcttagta
cgggccgcccgccggaggggcgccgccacgccgccctga

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