Physeter macrocephalus (sperm whale): 112065843
Help
Entry
112065843 CDS
T06011
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112065843 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcad03000
]
112065843 (SOX17)
Transcription factors [BR:
pcad03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112065843 (SOX17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
112065843
NCBI-ProteinID:
XP_023982878
UniProt:
A0A2Y9SXF2
LinkDB
All DBs
Position
15:complement(77753378..77755792)
Genome browser
AA seq
408 aa
AA seq
DB search
MSSPDAGYASDEQSQPRSALPAVMAGLGPCPWAESLSPLGDMKMKGEAAASSGAPAGTAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPPAAALGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQALGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
LPGDCPAAGPYSYAQAADYAGHPEPPAAGPLHARLGPEPAGPAMPGLLAPPSALHMYYGA
MGSPAAAGGGRGFQVPPQPPPPGPGQPSPPPEALPCRDGADPGQSAELLGEVDRTEFEQY
LHFVCKPEMGLPYQGHDSGVNLADSHGAISSVVSDASSAVYYCNYPDV
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgagcagagccagccccggagcgcgctg
cccgccgtgatggccgggctgggcccctgcccctgggccgagtcgctgagtcccctcggg
gacatgaagatgaagggcgaggcggcggcgagcagcggggcgccggccgggacggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgccttcatggtgtgggcgaag
gacgaacgcaagcgcctggcgcagcagaacccggacctgcacaacgccgagctgagcaag
atgctgggcaagtcatggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gccgagcggctgcgcgtgcagcacatgcaggaccacccgaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcacggcctcgcc
gagccgccggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctgcccttccctgagcagggcttccccgcgggcccgccgctgctgcccccgcacatgggt
ggccactaccgcgactgccaggccctgggcgcgcccccgctcgacggctacccgctgccc
acgcccgacacgtccccgctggacggcgtggagcccgaccccgccttcttcgccgcgccg
ctgcccggggactgtccggccgccgggccctacagctacgcgcaggccgcggactacgcg
gggcacccggagccgcccgccgccgggcccctgcacgcccggctcggcccggagcccgcg
ggccccgcgatgccgggcctcctggcgccccccagcgccctgcacatgtactacggcgcg
atgggctcgccggcggcggcgggcggcgggcgcggcttccaggtgccgccgcagccgccc
ccgccgggcccggggcagccgtcgccgccgcccgaggcgctgccctgccgggacggcgcg
gaccccggccagtcggccgagctcctcggggaggtggaccgcacggaattcgaacagtac
ctgcactttgtgtgcaagcccgagatggggctcccctaccagggacacgactccggcgtg
aatctggcggacagccacggggccatctcctcggtggtgtccgacgccagctccgcggtg
tattactgcaactaccccgacgtctga
DBGET
integrated database retrieval system