Physeter macrocephalus (sperm whale): 112066681
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Entry
112066681 CDS
T06011
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 13-like
KO
K08331
autophagy-related protein 13
Organism
pcad
Physeter macrocephalus (sperm whale)
Pathway
pcad04136
Autophagy - other
pcad04140
Autophagy - animal
pcad04211
Longevity regulating pathway
pcad05010
Alzheimer disease
pcad05014
Amyotrophic lateral sclerosis
pcad05016
Huntington disease
pcad05017
Spinocerebellar ataxia
pcad05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pcad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112066681
04136 Autophagy - other
112066681
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
112066681
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
112066681
05014 Amyotrophic lateral sclerosis
112066681
05016 Huntington disease
112066681
05017 Spinocerebellar ataxia
112066681
05022 Pathways of neurodegeneration - multiple diseases
112066681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcad04131
]
112066681
03029 Mitochondrial biogenesis [BR:
pcad03029
]
112066681
Membrane trafficking [BR:
pcad04131
]
Autophagy
Autophagosome formation proteins
ULK complex
112066681
Atg1 complex
112066681
Mitochondrial biogenesis [BR:
pcad03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
112066681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
112066681
NCBI-ProteinID:
XP_054939816
Ensembl:
ENSPCTG00005000568
UniProt:
A0A9W2WKK9
LinkDB
All DBs
Position
4:complement(22593922..22601399)
Genome browser
AA seq
907 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVXVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAIGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LPLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGEVQLNGLGEGFQTVRIGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYGTAGEDIGV
TYPSVEDSQEVCTTSFSTSPPSQLMVSGKEGGVPLPPNQPAHGAQAGDQERLATYTPSDG
AHCAATPSSSEDTEAVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAM
FAPKNLELEDVDPMVNPPDSPETTSPLQGSLHSDGSSGGSSGNTQDDFVMIDFKPAFSKD
DILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFDAFVETL
QWPSAYTALSSCFTKAFIPLLLPAPCPGFAQQLAPRLPAVAIHHSTFQLVAQRLAAAFLQ
DPISERPGRLSPDFELSLGGAEQLSRPALVPQPCTVKGMSPRRTCTAPPGQGWDQSCLQL
WPGTPVGTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYGTA
GEDIGVTYPSVEDSQEVCTTSFSTSPPSQLMVSGKEGGVPLPPNQPAHGAQAGDQERLAT
YTPSDGAHCAATPSSSEDTEAVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSL
DIPFAMFAPKNLELEDVDPMVNPPDSPETTSPLQGSLHSDGSSGGSSGNTQDDFVMIDFK
PAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKLAVHEKNVREFD
AFVETLQ
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatctcaattcccaggacagaaaggacctggacaaattcattaagtttttt
gccctcaagactgtctaagtgattgtccaggctcgactgggcgagaagatttgtactcgt
tcatcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggcgctggcagggcagctgcctgccatcgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgccgtgtacaacaga
ctgccgttgctactgaagtctctccttgctataactagggtgacaccagcttacagactc
tccaggaaacaagggcatgaatatgtcatattgtatagaatatattttggggaagttcag
ctgaatggcttaggagaaggtttccagacagttcgtattgggacagtgggtacccctgtg
ggcaccatcactctttcttgtgcttacagaattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatggggattattattgatcactttgtggaccgtccctat
cccagctcctcacccatgcatccctgcaattacggaaccgctggtgaggacattggagta
acatatccttctgtggaagattctcaagaagtgtgtaccacctctttttccacctcccct
ccatcccagctcatggtttccgggaaggaaggtggggtaccccttcctcccaaccagcct
gcccatggtgcccaggctggtgaccaggagagactggcaacctacaccccttctgatggg
gcccactgtgctgccaccccttccagcagtgaggatactgaagctgtgtcaaacagcagt
gagggacgggcctccccccatgatgtcttggagaccatctttgtccggaaagtgggggct
tttgtcaacaaacccatcaaccaggtgaccctgaccagtttggacataccctttgccatg
tttgctcccaagaatttggagctggaggatgtggatcccatggtgaatcctccagattcc
ccagagactacatctcctcttcagggcagcctgcactctgatggctccagtgggggcagc
agtggcaatacccaggacgactttgtcatgatcgacttcaaaccagctttttctaaagac
gacattcttccgatggacttggggaccttctatcgtgaatttcagaacccccctcagctg
agcagcctctccatagatatcggggcacagtccatggctgaggacttggactcactacca
gagaagctggctgtgcacgagaagaatgtccgagaatttgatgcctttgtagaaaccctg
cagtggccctctgcttataccgccctcagcagctgcttcacaaaggctttcatccctctc
ctcctgccggccccctgccccgggtttgcccagcagctggcccctcgcctgcctgccgtt
gccatccaccattcgaccttccagctggtggcccagagactggcagcagcctttcttcag
gaccccatcagtgagaggccagggaggctgagccctgactttgagctgagcctgggagga
gcagagcaactgtcaaggccggcccttgtccctcagccctgtacagtgaaaggtatgagc
cctagacggacctgcacagcacccccgggacagggctgggaccagtcgtgtctccagctt
tggccgggtacccctgtgggcaccatcactctttcttgtgcttacagaattaacttggca
ttcatgtccaccaggcactttgagaggaccccacctatcatggggattattattgatcac
tttgtggaccgtccctatcccagctcctcacccatgcatccctgcaattacggaaccgct
ggtgaggacattggagtaacatatccttctgtggaagattctcaagaagtgtgtaccacc
tctttttccacctcccctccatcccagctcatggtttccgggaaggaaggtggggtaccc
cttcctcccaaccagcctgcccatggtgcccaggctggtgaccaggagagactggcaacc
tacaccccttctgatggggcccactgtgctgccaccccttccagcagtgaggatactgaa
gctgtgtcaaacagcagtgagggacgggcctccccccatgatgtcttggagaccatcttt
gtccggaaagtgggggcttttgtcaacaaacccatcaaccaggtgaccctgaccagtttg
gacataccctttgccatgtttgctcccaagaatttggagctggaggatgtggatcccatg
gtgaatcctccagattccccagagactacatctcctcttcagggcagcctgcactctgat
ggctccagtgggggcagcagtggcaatacccaggacgactttgtcatgatcgacttcaaa
ccagctttttctaaagacgacattcttccgatggacttggggaccttctatcgtgaattt
cagaacccccctcagctgagcagcctctccatagatatcggggcacagtccatggctgag
gacttggactcactaccagagaagctggctgtgcacgagaagaatgtccgagaatttgat
gcctttgtagaaaccctgcagtaa
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