Pituophis catenifer annectens (San Diego gophersnake): 139307863
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Entry
139307863 CDS
T11059
Symbol
LRRC4C
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139307863 (LRRC4C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pcae04515
]
139307863 (LRRC4C)
Cell adhesion molecules [BR:
pcae04515
]
Immunoglobulin superfamily
NGL family
139307863 (LRRC4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_14
V-set
LRR_9
Ig_2
LRRNT
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
139307863
NCBI-ProteinID:
XP_070787318
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MLNKMSLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDAISTNTRLLNLHENQIQIIKVNSFKHLRHLEVLQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLSTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLVKLDELDLSGNHLTVIKPGSFQ
GLMHLQKLWLIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHLERIHLHHN
PWNCNCDILWLSWWIKDKAPSNTACCARCNTPPSLKGRYIGELDLNYFTCYAPVIVEPPT
DLNVTEGMAAELKCRASTSLTSISWITPNGSVITHGAYRVRISVLSDGTLNFTRVTAQDT
GLYTCLVSNSVGNTTASATLNVTAQECITYFSTITVETVEPSQDEARTTEQVWPTPVIDW
DTTNATTSLIPQSTRSMEKAFTIPVTDFSNGIPGIDEVMKTTKIIIGCFVAITLMAAVML
VIFYKMRKQHHRQNHHAPTRTVEIINVDDELTGDTPIESHLPMPAIEHEHLNHYNSYKSP
FNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgagcttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccttgcttgtggtgctactggctcttcaacttcttgtggttgctggt
ttggtcagagctcagacttgcccttctgtctgttcctgtagcaatcagtttagcaaagta
atttgtgtgagaaagaatctgagagaggtccctgatgctatatctactaacactcggtta
ttgaatctccatgagaaccaaattcaaataatcaaagtgaatagcttcaaacacctgagg
catctagaagtcttgcaactgagcaggaatcacattagaacaattgaaattggggccttc
aatggtctggctaatctcaatactctggaactctttgacaatcgtcttagcaccattcct
aatggggcatttgtgtacttgtcaaaattgaaggaactttggttgcgaaacaacccaatt
gaaagtattccttcttatgcttttaatagaatcccttccctgaggaggttagatctgggg
gaattaaaaaggctttcatatatctctgaaggtgcctttgaaggtctatccaatctgagg
tatttgaaccttgctatgtgcaaccttcgggaaattcctaacctcacaccacttgtaaaa
ctggatgagctagatctttctgggaaccacttaactgttatcaagccagggtctttccaa
ggattaatgcacttgcagaaattgtggctgatccaatcccagattcaggtgattgaaaga
aatgcctttgataaccttcagtcactagtagagatcaatctggcccacaacaatctaaca
ctactgcctcatgacctcttcacacctctccatctggaaagaatccacctgcatcataac
ccttggaattgcaactgcgacatcctatggctcagctggtggattaaagacaaagcaccc
tccaacactgcatgctgtgcccgttgcaacacacctcccagtttgaaaggaagatacatt
ggtgagttggacctaaactacttcacatgctatgctcctgtgattgtggagccaccaaca
gacctcaatgtcactgaaggcatggctgctgagcttaaatgccgagcatcaacatccctg
acctctatatcttggattactccaaatggatctgttataacacatggggcttatagggtt
cggatttctgtgctcagtgatggcacgttaaactttacaagggtaaccgcgcaagacaca
ggcttgtatacatgcttggtgagtaactctgtggggaatacaacagcttctgcaactctt
aatgtaaccgcacaggagtgtattacttatttttcaaccatcacagtagaaactgtggaa
ccttctcaggatgaggcacggaccacagaacaggtttggcccacaccagttattgattgg
gacaccactaatgcaacaacctctctcataccacagagcacaaggtcaatggaaaaagct
ttcacaattcctgtgacagattttagcaacgggatcccaggaatagatgaggttatgaag
actaccaaaatcataattggttgttttgtggcaatcacacttatggctgctgtgatgttg
gtcattttttacaaaatgagaaaacaacatcaccggcaaaatcatcatgctccaacacgg
actgtagaaatcattaatgtggatgatgaacttacaggtgatacacctatagaaagtcat
ttgcccatgccagcaatagagcatgagcacttaaaccactataactcttataaatctcct
ttcaaccacacaacaacagttaacacaataaattccatacacagttcggtgcatgaacca
ttattgatccgaatgaactctaaagacaatgtacaagagactcagatctaa
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