Pituophis catenifer annectens (San Diego gophersnake): 139308057
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Entry
139308057 CDS
T11059
Symbol
NRXN3
Name
(RefSeq) neurexin 3 isoform X1
KO
K07377
neurexin
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139308057 (NRXN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139308057 (NRXN3)
Membrane trafficking [BR:
pcae04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
139308057 (NRXN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
hEGF
Motif
Other DBs
NCBI-GeneID:
139308057
NCBI-ProteinID:
XP_070787547
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MDFSLHSASFTLKVTLLLGSFLSLCLGLEFMGLPNQWARYLRWDASTRSDLSFQLKTNIS
AGLLLYFDDGGVCDFLCLSLMDGRIQLQFSVDCAEATIVTEKQVNDSNLHFLMVSRNHLR
TVLVLDGEAKPGEVRPQRQYMNIVSDLFLGGVPSDIRPAALTLESVLGEPPFKGFIMDLK
YGNSEPQLLGHQGVRLDMEGLCTENPCENGGTCFLLDGEPQCDCSATGYIGKLCSEEEYV
MHGPGHIELWSSVGSLVLSVHGGAGRAGSGDIHGASRLGKNENVATFRGSEYLCYDLSQN
PIQSSSDEITLSFKTWQRNGLILHTGKSADYVNLALKDGAVSLIINLGSGAFEAIVEPVS
GKFNDNQWHNVKVTRNLRQHSGIGHAMVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDD
FFYVGGSPSTADLPGSPISNNFMGCLKEVVYKNNDIRLELSRLARIGDTKMKIYGEVKFT
CENVATLDPINFENPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDSRS
QKNTKVDFFAVELLDGNLYLLLDMGSGTVKVKATQRKANDGEWYHVDIQRDGRSGTISVN
SRRTPFTASGESEILDLEGDMYLGGLPENRAGLVLPTELWTAMLNYGYVGCIRDLFIDGR
SKNIRQLAEQQNAAGVKSSCIKVNTKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTC
EREASVLSYDGSMYMKIVMPMVMHTEAEDVSFRFMSQRAYGLLMATTSRDSADTLRLELD
GGRVKLMVNLDCIRINCNASKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVAEG
TMVGDHTRLEFHNIETGIMTEKRYISVIPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCEL
KARFGLRNIIADPVTFKTKSSYLSLATLQAYTSMHLFFQFKTTSADGFILFNSGDGNDFI
AVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTRVVTQV
INGAKNLDLKGDLYIAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRS
GQIERGCEGPSTTCQEDSCANQGICIQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGG
LILYTWPANDRPSTRTDRLAVGFSTTVKDGILVRIDSAPGLTDFLQLHIEQGKIGVVFNI
GTVDISIKEESTPVNDGKYHVVRFTRNGGNATLQVDGWPVNEHYPSGNTDTAFQLVKQKI
PFKYNRPVEEWLQEKGRQLTIFNTQAQIAIGGKDRGRLFQGQLSGLYYNGLKVLNMAAEN
NPNIKINGSVRLVGEVPSILGTAPTTSMPPEMSTTVMETTTTMATTTTRKNRSTPTIQDR
DSRHTDDLVSSAECSNDDEDFIECEQSVGGELVIPLLVEDPLDIPPITTRAPFITLPTTF
RPLLTIIETTKDSLSMTSEAGLPCLSDQGSDGCDDDGLVISGYGSGETFDSNLPPTDDED
FYTTFSLVTDKTKDFRPNKVSETGRTTITALSPELIRSTASSSTGMVPKLPAGNMNNRDL
KPQPDIVLLPLPTAYELDSTKLKSPLITSPMFRNVPTANPTEPGIRRVPGASEVVRESSS
TTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQSNGTLMKEKQQS
SKSGHKKQKNKDKEYYV
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atggacttttcactccactctgcctctttcaccttgaaggtgaccttattgttgggatcc
tttctcagcctctgtcttggccttgagtttatgggccttccaaatcagtgggctcgttat
ctccgctgggatgcaagcacaagaagtgacctaagcttccaactgaagacaaacatctca
gctgggctccttctctactttgatgatggtggtgtctgcgactttctctgtttatccctg
atggatggacgcattcagctgcagttcagtgtagactgtgctgaggctacaattgttaca
gaaaagcaggtcaatgacagcaatttacattttttgatggttagtcgcaaccatctccgg
acagttctggttcttgatggtgaagccaaacctggtgaggtgcgtccacaacgtcagtat
atgaatattgttagtgacctctttttgggaggtgtcccatcagatatccgtcctgcagcc
ttaacccttgagagtgtcctgggtgagccaccatttaaaggatttatcatggacctgaaa
tacggcaattcagaacctcagcttctgggacaccaaggagtccgcctggacatggaaggt
ttgtgtacagagaatccttgtgaaaatggtggaacttgctttcttctggatggtgaacca
cagtgtgattgctcagccactggatacattgggaaactctgttctgaagaagaatatgtg
atgcatgggccgggacacatagaattatggagttctgtggggtccttggtgctctctgtc
cacggcggtgctggccgggctgggtctggtgacatacatggagcttctaggttggggaaa
aacgagaatgtagccactttccgtggctccgaatacctgtgctatgacctgtcccagaac
cccattcaaagcagcagtgatgaaatcacactgtccttcaagacatggcagcgcaacggc
ctaatcctgcacacgggcaagtcggctgattatgtcaacctggctctgaaagatggcgcc
gtctcactgatcattaacttgggatctggagcctttgaagccattgtggagccagtcagt
ggcaaatttaatgacaaccaatggcacaacgtaaaagtgactcgcaacctgcggcagcac
tcaggcattggacacgctatggtaaacaaactacattgtctggtgacaatctctgtggat
ggaatcctcaccactactggctacacacaagaggattatactatgcttggctcagatgat
ttcttctatgttggtggaagtcccagtacagctgatttacctggatctcctatcagcaat
aacttcatgggttgtctgaaggaggttgtttataagaataatgatattcgtctggagtta
tctcgtttggcaaggattggcgacacaaaaatgaaaatctacggggaggtgaaatttaca
tgtgagaatgtggccacattggatccaatcaattttgaaaatcccgaggcctacattagt
ctgcctaagtggaacaccaagcgaatgggatctatctcttttgacttccgcactacagag
cccaatggccttattcttttcactcatggtaaaccccaggagaggaaggattccagaagc
caaaagaacaccaaagtggatttctttgcagtagaactcctggatggaaatctctacctt
cttcttgatatgggctctggaactgtcaaagtaaaggcaactcagaggaaagccaatgac
ggagaatggtatcatgttgatatacagagagatggtagatcaggtaccatttcagtgaac
agcagacggacacctttcactgcaagtggagagagtgagatcttggatctggaaggagac
atgtacctgggaggactgcctgaaaatcgggctggccttgtccttcctactgagctgtgg
acagctatgttgaactatggttatgtgggctgtatccgagacctcttcattgatggccgg
agcaagaacatccggcagctggccgagcagcagaatgcagctggtgtcaagtcttcctgc
attaaggtcaacaccaaacaatgtgatagttatccctgtaaaaacaatgctgtctgcaag
gatggctggaaccgcttcatttgcgactgcacaggcactggctactggggaagaacatgt
gaacgggaggcctccgtcctgagttacgatggcagcatgtatatgaaaattgttatgcct
atggtcatgcatacagaggctgaggatgtgtccttccgcttcatgtcccagcgtgcctat
ggtctgctgatggccacaacatcacgtgattcagccgatacactacggcttgaattagat
ggaggccgggtcaaactcatggtcaatctagactgtatcaggataaactgtaacgccagt
aaaggaccagaaaccctttatgctgggcaaaaactcaatgataatgagtggcacacagtc
cgagtggtacgccgaggaaagagtctcaaacttacagttgatgatgatgttgccgaaggt
acaatggttggtgaccacactcgcttggagttccacaacattgagactgggataatgaca
gagaagcgttacatttctgtcattccttccagcttcattggccaccttcagagcctcatg
ttcaatggccttctctacattgacttatgcaagaatggagacattgactattgtgaattg
aaagcccgctttgggctccgtaacatcattgctgatcctgttaccttcaagaccaagagc
agctacctgagcctagcgaccttgcaggcctatacctccatgcatctcttcttccagttc
aagacaacttctgccgatggtttcatccttttcaacagtggggatggaaatgatttcatt
gcagttgagctggtcaaggggtatatacattatgtgtttgaccttggaaatggacctaat
gttatcaagggcaatagtgatcgcccattgaatgacaatcagtggcacaatgtagttatc
accagagacaacagcaacacccatagcctaaaagtggataccagggttgttactcaggtc
atcaatggtgccaaaaaccttgaccttaagggtgacctgtacattgctggactagctcaa
ggaatgtatagcaatctcccaaagctggtagcatccagagatggatttcagggctgtcta
gcatcggtggacttgaatgggcgtttaccagatctcattaatgatgctctgcaccgcagt
gggcagattgagcggggatgtgaaggaccaagcaccacctgtcaagaagattcctgtgcc
aaccaaggcatctgtattcagcagtgggaaggcttcacttgcgattgttccatgacatca
tattctggaaatcagtgcaatgatcctggggccacttatatctttgggaaaagtggaggc
ctcatcctgtatacttggccagcaaatgacagacccagtacaaggacagaccgcttagct
gttgggttcagcacaacagtaaaagatggcatcttggtacggattgacagcgcccctggc
cttactgactttttacaacttcatatagaacaaggcaaaattggtgtagtcttcaatatt
ggcacagtagatatctctatcaaagaagagagcactcctgtgaatgatggcaaataccat
gttgtgcgttttacccgaaatggtggtaatgcaacacttcaggtagatggatggccagta
aatgaacattacccttcaggaaacactgatactgcgttccaattggtaaaacagaaaatc
cccttcaaatataaccgacccgtagaggaatggctgcaggaaaaaggacgacagttaacg
atcttcaacacccaggctcaaatagccattggaggaaaagatagagggcgtctcttccaa
ggtcagctttccggtctctattacaatggcttgaaagtgctgaacatggcagcagaaaac
aaccccaacatcaaaatcaatggaagtgttcggctggttggtgaagtgccatctattctg
gggacagctcccacaacctctatgccaccagagatgtccaccactgtcatggaaactacc
acgactatggccactactacaacacgaaaaaatcgctccacacctaccattcaggacagg
gacagtaggcacactgatgacctcgtttcttcagcagaatgttctaacgatgatgaagat
ttcattgaatgcgagcagagtgtaggaggtgaattagttatccctcttcttgtagaagac
cctttagatatccctcctattactactcgtgcacctttcattacactccccactaccttc
cgtcccctcctcaccattattgagaccaccaaagattccctgtccatgacctctgaggcg
gggttaccttgcttgtcggaccaaggcagcgatggttgtgatgatgatggcttggtgata
tctgggtatggctcaggggaaacttttgactctaacctaccccctactgatgatgaagat
ttttacaccaccttctccttggtaacagataaaaccaaggactttagacctaacaaagtc
tccgaaactggtaggactactatcacagctttgtcccctgagctgatccgctccacagct
tcgtcctcgactgggatggtgcccaaattgccagctggcaacatgaataaccgtgacctc
aaaccccagcctgatatagtcttgcttccgttgcccactgcctatgagctagacagcaca
aaactgaagagcccgctaataacttcccccatgttccgtaatgtgcccacagcaaacccc
acggagccaggaatcagacgggttccgggggcctcagaggtggtccgtgagtcgagcagc
acaacgggaatggtcgtcggcattgtagctgctgctgccctctgcatcctgatcctcctg
tatgccatgtacaagtacaggaacagggacgaagggtcctatcaggtggatgagacgcgt
aactacatcagcaactcagcccagagcaatggcacgctcatgaaggagaagcagcagagt
tcaaagagcggccacaagaaacagaaaaacaaggacaaagaatattatgtttaa
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