Pituophis catenifer annectens (San Diego gophersnake): 139308080
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Entry
139308080 CDS
T11059
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2 isoform X1
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139308080 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139308080 (CPSF2)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
139308080 (CPSF2)
U7-dependent histone pre-mRNA processing factors
139308080 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
139308080
NCBI-ProteinID:
XP_070787606
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNILETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLADLARVPSPKVVLASQPDLDCGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNASEKVIDIELRKRVKLEGKELEEYLEKEKIKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPSVHKTKHDLMMKGEGNRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKNKLESGLTNGEEPMDQDLSDVPTKCISAMESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLTESCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELRDDGEDT
EMQVDAPSSDSSAVAQQKAIKSLFGDDDKEICEESEIIPTLEPLPPNEVPGHQSVFMNEP
RLSDFKQVLLREGVQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCEDFYKIRDLLYEQY
AIV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaagctaacaaccctctcaggggttcaggaagaatccgctctctgc
tacttacttcaggtagatgagtttcgctttttgttggattgtggctgggatgagaatttt
tctatggacatcattgattccctgaggaaacatgttcaccaggttgatgcagtacttctt
tcacatcctgatcctctgcacttgggtgctctcccatatgcagtaggaaagatggggttg
aactgtgctatttatgcaactattcctgtatacaaaatgggtcagatgttcatgtatgac
ctctatcagtcacgccataataccgaagatttcaccttgttcactttggatgatgtggat
gcagcttttgataaaatacaacaactaaaattttctcagattgtcaatttgaaaggtaaa
gggcatggtttgtcaatcactccactaccagcaggccacatgataggaggtacaatatgg
aaaatagttaaagatggagaagaggaaattgtttatgcagttgatttcaaccacaagagg
gagattcatttaaatggatgttccttggaaatgttaagtagaccttctttgctcatcact
gattcgttcaatgctacttatgtacagccaaggcggaaacaaagagatgagcaactgcta
acaaatattttggaaacattgaggggtgatggaaatgtcctaatagctgtggacactgca
gggagagttttggaacttgcccaactgcttgatcaaatatggaggacaaaagacgctggt
ttaggcgtttattccttggcacttttaaacaatgtcagctacaacgttgtggagttctca
aaatctcaggtggaatggatgagtgacaagctaatgaggtgctttgaagataagagaaac
aatcctttccagtttcgtcatctgtctctttgtcatggacttgcagatttggctcgtgtt
cctagtcccaaagttgttcttgctagccagccagatctggactgtggattttcaagggat
ctctttatacaatggtgtcaggatcccaaaaactctattattttgacatacagaacaact
cctggaacactagcacggtttttaatagataatgcttctgaaaaagttatagacatagag
ctcaggaaacgtgtaaaacttgaaggaaaagaacttgaggaatacctggaaaaagaaaaa
atcaaaaaggaggcagcaaaaaagttagaacagtcaaaagaagcagatatagattccagt
gatgagagtgatgctgaagaggatattgatcaaccatctgttcataagaccaaacatgat
ctcatgatgaaaggtgaagggaatcgaaaaggaagcttcttcaaacaagccaaaaaatct
tatcctatgtttcctgctccagaggagagaattaaatgggatgaatatggagagattatc
aaacctgaggatttcctcgttccagaacttcaggcaacagaagaagaaaagaacaaatta
gaatctggccttacaaatggagaagaacctatggatcaagatttatcagatgttcctact
aaatgcatttcagcaatggaatcaatggaaataaaagctcgagttacatacatagattat
gaaggccgctcagatggagactccattaaaaaaattattaatcagatgaagccacggcaa
ttgattattgtccatggacctcctgaggccagtcaagatctcactgaatcttgtagagct
tttggggggaaagacattaaagtttacatgcccaaactgcatgaaaccgtagatgcaacc
agtgagactcacatatatcaagttaggttaaaagactccttagtcagttcccttcagttt
tgtaaagctaaagatgcagaacttgcatggatagatggagttctggacatgcgagtatca
aaagtagacacaggggtaattttggaagaaggggaactgagagatgacggtgaggacact
gaaatgcaagtagatgcaccctcttcagattccagtgctgtggcacagcaaaaggccatt
aaaagtctctttggtgatgatgacaaagaaatctgtgaggagagtgaaattattcctact
ttggagcccttaccacccaatgaggttcctggacatcagtcggtcttcatgaatgagcca
agattgtctgattttaagcaagttctgttgcgagaaggagttcaagctgaatttgtggga
ggagttctagtgtgtaataacttggttgctgttcgcaggactgaaactggacgtattgga
ttggaaggttgtctctgtgaagatttctataaaattagagaccttttatatgaacagtat
gctattgtctaa
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