Pituophis catenifer annectens (San Diego gophersnake): 139308188
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Entry
139308188 CDS
T11059
Symbol
TBPL2
Name
(RefSeq) TATA box-binding protein-like 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139308188 (TBPL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139308188 (TBPL2)
03021 Transcription machinery [BR:
pcae03021
]
139308188 (TBPL2)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
139308188 (TBPL2)
Transcription machinery [BR:
pcae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139308188 (TBPL2)
RNA polymerase III system
TFIIIB
139308188 (TBPL2)
RNA polymerase I system
SL1/TIF-1B
139308188 (TBPL2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
139308188
NCBI-ProteinID:
XP_070787757
LinkDB
All DBs
Position
Unknown
AA seq
325 aa
AA seq
DB search
MDGEFSLESYLDECSSQDDLPSNSPQMYSPMSPFESDLPISVIPGTLFTSQPDQGKDFSS
VDLSFLPDDFGQDGKHGSNNNNNMLEDSQDPQLGIQDSGIFSEDSAGSQQRDENAIEPSS
DFSGTCPSIAPIAPMTPVNPTSEASGIVPQLQNIVATVNLACKLDLKNIALHARNAEYNP
KRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFK
IQNMVGSCDVRFPIRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTG
AKDRSEIYEAFENIYPILKGFKKVT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggatggggaattctcattggaaagctacctagatgagtgttcaagccaggatgatctt
ccatcaaatagccctcaaatgtattctcccatgagtccctttgaatcagatttgcctatt
tctgtcattccgggcacattgtttacttctcagcctgaccaaggcaaagacttctcttca
gtagatctcagcttcctaccagatgattttggacaagatggcaaacatggcagcaacaac
aataacaacatgctggaagactctcaagaccctcagttgggaatacaagacagtggaatc
ttctcggaggacagtgcggggtcccaacagagagatgaaaacgcaattgagccatcatct
gatttttctgggacgtgtccctccatagcccccatagctcccatgactcctgtgaaccct
acttcagaagcttctggcattgtcccacagttacagaacatagtagccactgtaaatttg
gcttgcaaattggacctaaaaaatatagcccttcatgccagaaatgcagaatataatcca
aagagatttgctgctgtaattatgagaattagagaaccaagaacaactgccctcatattt
agttctggtaaaatggtgtgcacaggagccaaaagtgaagagcagtcacgactggcagcc
agaaagtatgctcgcgtggtacagaagctcgggtttcctgcaaaattcctggatttcaaa
atacagaacatggtgggcagttgtgatgtgagatttcccatccgcttagaaggattagtt
ctaactcatcaacaattcagcagttatgaaccagagctgtttcctgggcttatctacaga
atggtcaaaccaagaattgtactgcttatttttgtgtctggaaaagttgttttaactggt
gccaaagaccgttctgaaatatatgaagcatttgaaaacatatatccaattttaaaaggt
ttcaagaaagtcacttaa
DBGET
integrated database retrieval system
