Pituophis catenifer annectens (San Diego gophersnake): 139308508
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Entry
139308508 CDS
T11059
Symbol
CUX1
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139308508 (CUX1)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
139308508 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
139308508
NCBI-ProteinID:
XP_070788185
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MAANVGSMFQYWKRFDLQQLQRELDATATVLANRQDESEQSRKKLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVSALDLGQQLQLKVQRMH
DIETENQKLRETLEEYNKEFTEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQ
NDFAEKERMLQETQISTASKLEEAEHKLQTLQTALEKTQTELFDLKTKYDEEMTAKSDEI
EMIMTDLERANQRAEVAQREAESLKEQLSSANKSLQLANQIQKAPDVEQAIEVLTRSSLE
VELASKEREIAQLVEDVQRLQGNLTKLRENSTSQISQLEQQLTAKNSTLKQLEEKLKVQA
DYDEVKKELNILKSMEFAPSDGSSIQDAASKPLEVLLLEKNRLLQSENATLRITNSDLSG
SARRKGKDQPESQRPATLPASPPPQLPRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASS
GLPLASTGKFALNSLLQRQLMQSFYTKAMQEAGSTSMIFSVGPYSTNSISSQSPLQQSPD
VNGMAPSPNQSESTGSTSEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSE
ILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLSRLFQEVPKR
RNGSEGNITTRIRATEVGSDEAIKSILEQAKRELQVQKTAEPAQPPSTSTSSSSDDAIRS
ILQQARREMEAQQAALEPALKATPLSQAEMSILSSKLIPTPAVSSVSSYSPLALSLKKHS
SSVDSAVSSLQTVPGLKKEAQEASLLDLHGMPDSAQGVLRHVKNELGRSGVWKDHWWNTV
QPERRNTAPPEDPKMEESTSGKEKASNQARSDRNQQLQGPSSSEYWKEWPNAESPYSQSS
ELSVTGASRSETPQNSPLPSSPIVPLSKPSKPSVPPLTPEQYEIYMYQEVDTIDLTRQVK
EKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQG
VLPSQGQPQGQVLHSVSSLQDSLQQGCASSESTPKTSASCSPAPDSPMSSSDSVKSLTEL
VQQPCPAIETSKEGKLQESSEASTLDSHCTTPLPLSGHSSLSIQELVAMSPELDTYGITK
RVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPN
NVEKLMDMKRMEKKAYMKRRHSSVSDSQPSESSSTGIDYSQGASPQPQHQLKKPRVVLAP
EEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRELFIEEIQAGGQ
SQAGSSDSPSARSNRAVHSSEGDSCDGVDTEGPSDTKQGSLEADEFSNATMKSQGGRAAS
AFEAGEEALRDAGSSEKTETFQLGMESLEDTDDEGRLKAPRQGSPLSSQHSGETLEARPN
CAPDEDASTSVLAGQSSCKPRGESVEKVPIVPSTSSTLAITSSQKSNSLKSLFSFSEAAC
SKNTRDNTLRKKKAANLNSIIHRLEKAASREEPVEWEF
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagcgagaacttgatgcaacggcaacagtgttggctaaccgacaagatgaaagtgaacaa
tcaagaaagaaacttattgaacaaagccgtgagttcaagaaaaacactccagaagactta
cgcaaacaggtagctccactattgaagagtttccagggagagattgatgcattaggcaaa
agaagcaaagaagcagaagcggcattcctaaatgtctacaagagattaattgatgttcca
gatcctgtttcagctctagatctggggcagcagctccagctgaaagtccagcgcatgcac
gatattgaaactgagaaccagaaacttagggaaacccttgaggaatacaacaaagaattt
acggaagtgaagaatcaagaggtgacaataaaagcacttaaagagaaaattcgggaatat
gagcagaccctgaagaatcaagcagagaacattgctcttgaaaaagaacaaaagttgcaa
aatgactttgctgagaaagaaagaatgttgcaagagacgcaaatctcaacggcctcaaag
ctggaggaagccgaacacaaactgcagacgttacaaacagccttggaaaaaacacagaca
gaattatttgacctgaagacaaaatacgatgaggaaatgacagcaaagtcggatgaaatt
gagatgatcatgacagatcttgaaagagcaaatcaaagggcagaggtagctcaaagagaa
gcagagtccttgaaggaacaactctcatctgcaaacaaatctctccagctggctaaccag
attcagaaagcaccggatgtggagcaggccatcgaagtgttgacacgatccagcctggaa
gtagaactggcctccaaagaacgagaaattgctcagctggttgaagatgttcagagactc
caaggcaatcttaccaaacttcgggaaaattccaccagccagatctcccagctcgagcag
cagctgactgccaagaacagcactctcaaacaactggaagaaaagttgaaggtgcaagct
gactatgatgaggttaagaaagaattaaacatcctgaagtccatggagtttgcgccatct
gacggctcaagcatccaggatgctgcatcaaaaccactggaggtcttactgctggagaaa
aaccgcctgctgcagtcggaaaatgccacgctgcggatcacgaacagtgaccttagcggg
tcagccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcc
tcccctcctcctcagttgccccgcaatgcaggggagcaggcttccaatactaatggtaca
caccagttctcaccaacgggtttaagtcaagactttttcagctcatccttggcaagctcc
ggcttacccctggcttctacaggaaaatttgcactaaactctctcctccagcgccaactt
atgcagtccttctacaccaaggcaatgcaggaagcgggaagcacaagcatgattttttca
gtaggtccctacagcacaaactccatatcttcccaaagccccttgcaacaaagcccagac
gtcaacggcatggccccatcacccaaccaatcagaaagcaccggcagcacctcggaaggt
gaggaaatagacacggccgaaattgcacgtcaggtcaaagagcaattgatcaagcacaat
atcggacagcggatctttggacactacgtcttgggactttctcaaggatctgtgagtgag
attctggctcgacctaaaccatggaacaagctgaccgtgagaggcaaggagccattccat
aaaatgaagcagttcctttctgatgagcagaacatcttggctttgcgcagcatccaaggc
aggcagagagagaatccaggccagaacctgagcaggctatttcaggaagtaccgaaacga
agaaatgggtcagaaggtaacattaccacaagaatccgagctacagaagttggctctgat
gaagctatcaaatccattctggagcaagcaaaaagggagctgcaggtacagaaaacagct
gagccggctcagccaccttccacatcaaccagcagcagttccgatgatgctattcgctcc
attttgcaacaggctcggcgagagatggaagcccagcaggctgcccttgaacctgcctta
aaagccacccctctgtcccaagccgaaatgtccatcttgtcctcaaaactgatccccacg
cctgccgtttcttcagtttctagttactctcccctggctctgtccttgaagaaacactcg
tcctctgtggattccgctgtgtcttccctacagactgtccccggtctcaagaaggaagcc
caagaggcctcccttctagacctccacgggatgcctgactcagcacaaggtgtactgagg
catgttaaaaatgaactgggacgcagtggggtatggaaggaccattggtggaacactgtg
caacctgagagaaggaacacagctcctccagaagatcccaaaatggaggagagcaccagt
gggaaagagaaggccagcaaccaggctcgttcagaccgtaaccagcaactccaagggccc
tcctcctcggaatattggaaagagtggcccaacgcagaatctccctattctcagagctct
gaactgagtgtgacgggggcaagtcgcagtgagacaccccaaaacagcccccttccttct
tcccccattgttcccttatcaaagccatcgaagccttccgttcctccattaacccctgag
cagtatgagatttacatgtaccaagaagtggatacgatagatctaacccgtcaggtcaaa
gagaagctagcaaaaaacggcatctgccaaaggatatttggggaaaaggtgctgggtctt
tcccagggcagcgtcagcgacatgctgtctcggccaaagccatggagcaaattgacacag
aaggggcgtgagccattcattcgtatgcagctgtggctaaatggcgaactcggacaggga
gtcttgccatctcaagggcaaccccaaggccaagtccttcattctgtgtcatcactgcaa
gactctcttcagcagggatgtgcaagctcagaaagcaccccaaagacctctgccagttgc
agtcctgctcccgattccccaatgagttccagcgactctgtgaaaagcttgacggaactg
gtccagcagccctgcccggccattgaaaccagtaaggaaggcaagctgcaggagtcgagc
gaggcctcgactttggattcccactgcacaaccccattgcctctctccggccattcatca
ctcagcattcaggaactggtcgccatgtcaccggaacttgatacctatggcatcaccaag
cgggttaaagaggtgctcacggacaacaaccttggtcagcgtttgtttggggaaacgatc
ctggggctcacacaaggctcagtctcagacctccttgctcgcccaaagccctggcacaaa
ctgagcttgaagggccgggagccatttgtgcgtatgcagctgtggctcaacgacccaaac
aatgtggagaagctgatggacatgaagcgcatggagaagaaagcatacatgaaacggcgg
cacagctccgtcagtgacagccagccttcagaatcatcttccactggaatagattacagc
cagggggccagcccacaaccacagcatcagctcaagaagcctcgggttgtcttggctccg
gaagagaaagaagctctgaaacgagcctatcagcaaaagccatacccatcaccaaaaact
atcgaggaacttgccacacagctcaacttgaagaccagcaccgtcattaattggttccac
aattataggtcacgtattcgtcgagagctgtttattgaagaaatccaagctggaggccag
agccaggctggatcgagtgactctccttcagctagaagtaaccgggcagttcacagctcc
gaaggagacagttgtgatggggtggacacggaaggcccatcggatacaaaacaaggcagc
ctggaagcagatgagttcagcaatgcaaccatgaagtctcagggagggcgagcagcgtcg
gctttcgaagcaggggaagaggcactgcgagacgccggatcttcggagaaaacggagaca
ttccagttgggaatggagagcttggaagacacagacgacgagggaaggctcaaagcacca
cgtcagggttctccactgagctctcaacattcaggagaaactctggaggccaggcccaac
tgtgctccagacgaggatgcctctacctcagtccttgcagggcagagctcctgcaagccc
aggggagaaagtgtggagaaagtgcccattgtgccaagtaccagttccacgctggccatc
accagctctcagaaatccaactcactcaagagcttgttcagcttttctgaggcggcgtgc
tccaagaacacacgggacaacaccttgaggaaaaagaaggcagcaaatttgaacagtata
atccaccgtttggagaaggctgcgagtcgagaggagcccgttgaatgggagttttga
DBGET
integrated database retrieval system
