Pituophis catenifer annectens (San Diego gophersnake): 139308610
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Entry
139308610 CDS
T11059
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04517
IgSF CAM signaling
pcae04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139308610 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139308610 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcae04812
]
139308610 (SPTBN1)
Cytoskeleton proteins [BR:
pcae04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
139308610 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
139308610 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
SCAR_helical
TPR_24
PH_11
Motif
Other DBs
NCBI-GeneID:
139308610
NCBI-ProteinID:
XP_070788348
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDEWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLIGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLVSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLSALRRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGRSGHFQQAVKEGEDMIAENHFGSEKIRERIS
DIQNQWANLEQLSSIRKKRLEEASLLHQFQADADDIDTWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRSIIDSLHEQAKALPEEYAESIDVQSRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMEIPEKLEDLEVIQHRFESLEPEMNS
QASRVAVVNQIARQLIHNGHPNEKEIKAQQDKLNTRWSQFRELVDIKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQELGNDLAGVIALQRKLTGMERDLVAIEAKLTDLQKEAE
KLESEHPDQARAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLMEAEKLLTQHENIKNEINNYEEDYQKMRDIGEMVTQGQTDAQYMFL
HQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHKKN
REVASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIQKEGMQLIAEKPETEAIVKEKLTSLHQMWQELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEVEELQ
SQAQALSQEGKSTDEVDGKRYTVEKKFTELLEPLNERKAHLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIHGHQPRIDDIFERSQNILTDSSLNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLSEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNRMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQSAYAGDKADDIQKRENEVLEAWKTLLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPRTGEESQWDGTKGEQVAQNGLPPDQESPRMGEARETNEMVNGAADQRTSSKETS
PAPSPTADRKAKTSLQAQTAATLPAKTQEIPSAQMEGFLNRKHEWESHSKKASNRSWHNV
YCVINNQEMGFYKDAKAASSGIPYHSEVPVSLKEAVCEVAVEYKKKKHVFKLRLTDGNEY
LFQAKDEEEMNAWIQAITFAISSDKIELSTSTQSTPASNRAQTLPASVTVTSESSPGKRE
KDKEKRFSLFGKKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacagtagcaacagactatgacaacattgaaatccaacagcaatatagcgat
gttaataaccgctgggatgtagatgagtgggacaatgagaatagttctgctcggctgttt
gagaggtctcgcattaaagccttagcagatgagcgagaggcagtacagaaaaagacattc
actaagtgggttaactctcacttggcacgtgtatcctgtagaattacagacttgtacacg
gatcttcgtgatggacgaatgcttatcaaactattggaagttctttcaggcgagagactt
cccaaaccaacaaagggaaggatgcgaatccattgcttggaaaacgttgacaaagctctc
cagtttctgaaagaacagcgagtgcatcttgaaaacatgggatctcatgatattgtggat
ggaaatcacaggctaacccttggacttatttggacaattatattgagattccagattcag
gacatcagtgttgaaacagaagataacaaagaaaagaaatctgctaaagatgccctactc
ctgtggtgccagatgaagacagctggctatcccaacgtcaacattcacaacttcaccacc
agctggagggacggcatggctttcaacgcactaatccataaacacaggcctgatttaatt
gattttgataagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctg
gcagagcaacaccttggccttactaaactcctggatcctgaagatataagtgttgaccat
ccagatgaaaagtctattatcacctatgtggtgacatattaccactatttttctaagatg
aaagccttagctgttgaaggaaagcgaattggaaaggtgcttgacaatgcaattgaaacc
gagaagatgattgagaaatatgagtctcttgcctctgatctccttgagtggattgaacaa
accattatcattctgaacaatcgcaagtttgctaactcactgattggtgtgcagcaacag
ctacaagcattcaatacctaccgcacggtggaaaaaccgcccaaattcacagaaaaggga
aatctggaagtactgcttttcaccatccagagtaaaatgagggctaacaatcaaaaagtg
tacatgcccagagaaggaaaactcatctcagatatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcattgcgtaatgagctcatccgacaggagaaactg
gaacaacttgctcgcagattcgaccgtaaggcagctatgcgggagacttggctaagtgaa
aatcaacgactggtttctcaggacaactttggatttgatcttccagctgtagaggctgca
acaaagaaacatgaagctattgagaccgatattgcagcctatgaagaaagagtccaggca
gtggttgctgttgccagagaacttgaagcagagaactatcatgatattaaacgcatcact
gcgaggaaggataatgtgattcgcctatgggaatatctcctggagttactaagggcacgc
aggcaacgactagagatgaaccttggtctgcaaaagatcttccaagaaatgctctatatt
atggattggatggatgagatgaaggtgttgctagtgtctcaagattatggcaaacatctc
ttgggggtagaagacctgttgcagaaacatgctcttgtggaagctgacattgccatacag
gctgagcgagtgagaggggtcaatgcatctgcccagaaatttgctacagatggggaaggt
tacaaaccctgcgatccacaagttattcgggaccgtgtggctcacatggaattctgttac
caagagctatgtcaactgtcagccctacgtcgtgctcgcttggaagagtcacgacgtctt
tggaaattcttctgggaaatggctgaagaggagggatggataagagaaaaggaacagatc
ttgtcatcagatgattacggaaaagacttaaccagcattgtccggcttcttagcaaacac
aaggcatttgaagatgagatgagtggccggagtggtcacttccaacaagcagtcaaagaa
ggggaagatatgatagctgagaatcattttgggtctgaaaagatcagagagaggatttca
gatatccagaatcagtgggctaatttggagcagctctcttccatacggaagaaacgactg
gaagaagcttccctacttcaccagtttcaggctgatgctgatgacattgacacatggatg
ttggatatcctcaaaattgtctcaagcaatgatgttggccatgatgaatattcaactcaa
tccttggttaagaaacacaaagatgtggctgaagagattgcgagctacaggtcaataatc
gattctctccacgaacaagctaaagccttaccagaggagtatgcagagtccatagatgta
cagagcagattgtctggaatagaggaaaggtacaaagaggttgcagaactcacccggctt
cgtaagcaggcattgcaagacactttggctttgtataagatgtttagtgaagcagatgct
tgtgaactttggattgatgagaaggaacaatggctgaataacatggagatacctgagaaa
ctggaagatctggaagtgatacagcacagatttgaaagtttagaaccagaaatgaatagt
caagcatcacgtgttgctgtggtcaatcagatagctaggcagctgatacacaatggccat
ccaaatgaaaaagagatcaaagcacagcaagataagctcaatacaaggtggagccaattc
agggaactggtagacataaagaaagatgctcttatctcagctctcagtatccagaactat
catcttgaatgtaatgaaaccaaatcttggatcagggagaagactaaagttattgaatcc
acccaagagcttggcaatgacttggctggcgttatagctcttcagaggaagctaactgga
atggaacgtgacttggtagctattgaagccaagctcactgatctccagaaagaggctgaa
aagttagaatcggagcatcctgaccaggctcgagccattttgtctaggcttgctgaaatc
aatgatgtttgggaagaaatgaaaacaactctgaagaaccgtgaagagtccttgggagag
gcaagcaaactgcagcagtttttgcgtgacttagatgatttccagtcctggctttcccgt
actcaaacagccattgcctcagaagacatgcccaatacattgatggaagcagaaaagctg
cttacacagcatgaaaacattaagaatgaaattaataattatgaggaagactatcagaaa
atgagagatattggtgagatggtgacccagggtcagactgatgctcagtacatgttctta
caccagcgtctgcaggccttggatactggatggaatgagcttcacaaaatgtgggaaaat
cggcagaatcttctttcccagtcccatgcctaccagttattccttagagacacaaagcaa
gcagaggcatttcttaacaaccaggaatatgttttggcacatactgaaatgcccaccact
ttggaaggagcagaagctgctatcaaaaaacaggaggatttcatgaccacaatggatgcc
aacgaggagaagatcaatgcagtcgtagagacgggaagaagattggttagtgatggcaat
atcaactcagacaaaatccaagagaaagtggactccattgatgacagacataaaaagaat
cgtgaagtggccagtgaacttctgatgagattaaaagacaaccgagatcttcaaaagttt
cttcaagattgccaagagctatctctctggattaacgagaaaatgcttacagcacaagat
atgtcttatgatgaagcacggaaccttcacagcaagtggctgaaacaccaagctttcatg
gctgagcttggctccaacaaagagtggcttgacaaaatccaaaaggaagggatgcagctg
attgccgaaaagcctgaaacggaagcaattgtgaaagagaagttgacaagcctacaccaa
atgtggcaagaactggaaagcaccacccaaacaaaagctcagcggctttttgatgccaat
aaggctgagctgttcacccaaagctgtgctgacttagataaatggctgaatggcctggag
agccagatacaatcagatgattatggcaaagacctcacaagtgttaacattttgctgaaa
aaacaacagatgcttgagaatcaaatggatgtccgtaagaaagaggttgaggagctgcag
agtcaagcccaggcattgagtcaggaaggcaagagtactgatgaagttgatggtaaacgc
tacacggtggagaagaaattcacggaattgctggagcccttgaatgaaaggaaggctcac
ctactggcctctaaggagattcatcagttcaaccgggatgtggaggatgaaattttgtgg
gttggagagaggatgcctattgccacatccacagatcatggacacaatcttcagactgtt
cagttgttaattaagaaaaatcagacacttcagaaagaaatccatggacaccagcctcgt
attgatgacatttttgagaggagccaaaacatccttacagacagcagccttaatgccgaa
gcaatccagcagcggctcgcagatttgcagcagctgtggaacctcctgattgaggagaca
gagaaacgccacaagcgccttgaggaatcccacaaagcccaacaatattattttgatgct
gcagaagctgaagcctggatgagtgaacaggagctctacatgatgtcagaagagaaggcc
aaggatgaacaaagtgcggtttctatgttgaagaaacaccagattttggaacaagctgta
gaggactatgctgagacggtccaccaactttccaagaccagcagaactttggtagcagat
aatcatccagagagtgaacgtatcagcatgaggcaatcgaaagtggataagctatatgca
ggcctgaaagatctttctgaggagaggaggggcaagttggacgagagacaccggctattc
cagctgaaccgtgaagtggatgacttggagcagtggatagcggaaagggaagtggtggct
ggatctcacgaactgggacaagattatgagcatgtgacaatgttgcaagagagatttcgt
gaatttgcccgagacactggaaatattggacaggaacgtgttgataccgtcaatcgcatg
gctgatgaactcattaattctggacattctgatgctgctactattgctgaatggaaagat
ggtctcaatgaggcctgggctgatctcttggaactcattgacacaagaacacagatcctt
gcagcctcttatgaactacacaaattttaccatgatgccaaggagatctttggacgaata
caggacaaacataagaagcttcctgaagaactagggcgggatcaaaacacagtagaaact
ttgcaaaggatgcatacaacatttgaacatgacattcaggccttaggaacacaggtgaga
caactccaagaggatgctgcccgccttcagtctgcctatgctggggacaaagctgatgat
atccagaagcgggaaaatgaggttttggaggcatggaaaacgttgctagatgcctgcgaa
ggacgcagggtcaggctggtggatactggtgacaaattccgtttcttcagtatggtccgt
gacctcatgctttggatggaagatgtaattcgtcaaattgaagcccaagaaaagccaagg
gatgtttcttctgtagaactgctgatgaataatcaccaagggatcaaagcagaaatagac
gcccgaaatgatagctttacaacctgcattgagcttggtaaatcattgctggcaagaaaa
cactatgcttcagaagagataaaagagaagttactgcaattgacagaaaaaagaaaagaa
atgattgacaagtgggaagacagatgggaatggctgagattgattctggaagtacaccag
ttttcaagggatgccagtgttgccgaggcctggctgttgggacaggagccgtatttatca
agtcgtgaaatagggcaaagtgtggatgaagtggagaagctcatcaagaggcacgaagcc
tttgaaaaatcagccgcaacttgggatgaaagattttcagcacttgaaagacttaccacg
ttggaattgttggaagtacgtagacagcaagaggaagaggagcggaagagacagcctcct
tctccagagccaagccccagaactggggaggagtctcaatgggatggcacaaaaggagaa
caggttgcccagaatggtttgccaccagaccaggaatctccccggatgggagaagcaaga
gaaaccaatgaaatggtcaatggagcagcagaccagaggacaagttccaaagagacaagt
ccagctccttcaccgacagccgatcgcaaagccaagaccagcctccaggctcaaaccgct
gccactcttccagccaaaacacaagaaataccttccgcccagatggagggctttttaaat
cgtaaacatgaatgggaatcacacagcaagaaggcctcaaacagatcatggcataatgtt
tactgtgttattaacaaccaagaaatgggtttctacaaagatgcaaaggcagcttcctca
ggcattccataccacagtgaggtccctgtgagcctgaaagaagcagtatgtgaagtggca
gtagagtacaagaagaagaagcacgtattcaagttaaggttaactgatggcaatgagtac
cttttccaagccaaagatgaagaggaaatgaacgcatggatccaggccatcacatttgcc
atctcgtcagacaaaattgagttgtccacaagcacacagagcaccccagcttcaaaccgt
gcccagaccttgccagccagcgtgacagtaaccagtgagtccagtcctggcaaacgggag
aaagacaaagagaagagattcagcctttttggaaaaaagaagtga
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integrated database retrieval system
