Pituophis catenifer annectens (San Diego gophersnake): 139308730
Help
Entry
139308730 CDS
T11059
Symbol
SPAST
Name
(RefSeq) spastin
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139308730 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcae04812
]
139308730 (SPAST)
Enzymes [BR:
pcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
139308730 (SPAST)
Membrane trafficking [BR:
pcae04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
139308730 (SPAST)
Cytoskeleton proteins [BR:
pcae04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
139308730 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_22
Vps4_C
AAA_5
TIP49
AAA_14
Mg_chelatase
AAA_16
MIT
IstB_IS21
DUF815
NPHP3_N
nSTAND3
AAA_2
AAA_24
Motif
Other DBs
NCBI-GeneID:
139308730
NCBI-ProteinID:
XP_070788626
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MNSPGGRGKKKGSSASSSPTRTAGASPTSAAGQAPAPHRPQAAVASPHKRNLYYFSYPLF
AVFALLRFLAFQLGLLFAWLCERLSRGGALMAAAKGTSRAGDAPESVRTCHKRAFECIST
ALRIDEDEAAGQKEQAVEWYRKGIEELEKGIAILVIGQGDHYDRARRLQSKMMTNLAMAK
DRLQLLEKMQAVKQIPKLQMEVRSDNTNLVCRNGHLQSENGTVPKKKDPLSHSSNSLPRS
KSMAKTGSGGFSGHQRTPSYTGVSNVSAPRVPSAATQKATPKNNRTTKPSTPSTAVRKKK
DTKIFKNVDSNLANLILNEIVDSGPSVNFDDIAGQELAKQALQEIVILPSLRPELFTGLR
APARGLLLFGPPGNGKTMLAKAVAAESNSTFFNISAASLTSKYVGEGEKLVRALFAVARE
LQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLIEFDGVQSSGEDRILVMGATNRPQEL
DDAVLRRFTKRVYVSLPNEETRLLLLKNLLSKQGNPLTQKELAQLARMTDGYSGSDLTAL
AKDAALGPIRELKPEQVKNMSASEMRNIRLSDFNESLKKIKCSLSPQTLEAYIRWNKAFG
DTTV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaattctccgggagggagagggaagaaaaagggctcaagcgcctccagctccccgact
cggaccgccggagcctcccctacatccgcggccggtcaggctcccgccccacaccgccca
caggcggcggtggcttctcctcacaagcggaatctctactatttctcgtatccgcttttc
gccgtcttcgcgctgcttcgtttcctcgccttccagctcgggctgctcttcgcctggctg
tgcgagcgcctctctcgcggcggggcgttgatggccgccgccaagggcaccagccgggca
ggcgatgcgcccgagtcggtacgaacctgtcacaagcgcgccttcgagtgcatctccacg
gctctgcgcatcgacgaagacgaagcggcaggacaaaaggaacaagctgttgaatggtat
agaaagggaatcgaagaactcgagaaaggaatagctatattagttattggtcaaggagac
cattatgatcgagctcgtcgcctccagtctaaaatgatgacaaatttggcaatggccaag
gaccgtttgcagctgttagagaagatgcaggcagttaagcaaattcccaagctgcaaatg
gaagtccgtagtgacaatactaacctggtatgccgcaatggacatctccagtcagaaaat
ggaactgttccaaaaaagaaggatccactgtctcacagtagtaattcacttcctcgttca
aaatctatggcaaagactggatctggaggattttctgggcaccaaagaacacctagttat
actggagtttctaatgtttctgcacctagagttccttcagctgcaactcagaaggctact
ccaaaaaataatagaactaccaagccttctactccttcaactgctgtacgaaaaaagaaa
gacacaaagattttcaaaaatgtggatagtaaccttgctaatcttattctcaatgaaatt
gtagacagtgggccatctgtcaattttgatgatattgctgggcaggagttggctaaacag
gcactgcaagaaattgttatccttccctcacttagacccgaattgtttacaggacttagg
gctcctgcacgaggattgttgttgtttggcccaccaggaaatgggaagacgatgctggcc
aaagcagtggctgcagaatcaaattcaaccttctttaacataagtgctgcaagtctgaca
tcaaaatatgttggtgaaggagagaaactagtccgtgcactttttgcagtagctagagaa
cttcagccttctatcatttttattgatgaagtggatagtttattatgtgaaagaagagaa
ggtgaacatgatgctagccgacgtttaaaaacagaattcttaatagagtttgatggcgta
cagtcttcaggagaagatcgcattttagtaatgggagcaactaacaggccacaggagctt
gatgatgctgtactcagacgattcaccaaaagagtatatgtatcattgcccaatgaagag
actcgactgcttttactaaaaaatctcttgagcaaacaaggaaatccattaacccaaaag
gaattggcacagttagctagaatgacggatggatattcaggtagcgacttaacagcattg
gcaaaagatgcagcgttgggccctatacgagaattaaaacctgagcaggtgaagaacatg
tctgctagtgagatgaggaatattcggctgtcagatttcaatgagtctttgaagaaaata
aaatgcagtcttagccctcaaaccttagaagcttacattcgctggaacaaagcctttgga
gacactacagtttga
DBGET
integrated database retrieval system
