Pituophis catenifer annectens (San Diego gophersnake): 139308788
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Entry
139308788 CDS
T11059
Symbol
TULP4
Name
(RefSeq) tubby-related protein 4
KO
K24720
tubby-related protein 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcae04990
]
139308788 (TULP4)
Domain-containing proteins not elsewhere classified [BR:
pcae04990
]
Other domain-containing proteins
Tubby family proteins
139308788 (TULP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR35_TULP_N
Tub
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR19_1st
SOCS_box
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Prp19
WD40
Beta-prop_HPS5
WDR55
Beta-prop_ELP1_1st
EIF3I
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
139308788
NCBI-ProteinID:
XP_070788732
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
MYAAVEHGPVLFSDSNILCLSWKGRVPKSEKEKPVCRRRYYEEGWLATGNGRGVVGVTFT
SSHCRKDRNTPQRINFNLRGHNSEVVLVRWNEPFQKLATCDADGGIFVWIQYEGRWSVEL
VNDRGAQVSDFTWSHDGTQALISYRDGFVLVGSVSGQRHWSSEINLESQITCGIWTPDDQ
QVLFGTADGQVIVMDCHGRMLAHVLLHESDGILSMSWNYPSFLVEDSSESDTDSDDYSPP
QDGPAVYPVLVQNTKQLLTVSFTSGDISLMNNYDDLSPTTIRSGLKDVVAQWCTQGDLLA
VAGMEKLSQLAELNAASFLKSALVKFYNIHGEHIYTLETPVQRPIISICWGHRDSRLLMA
SGPALYVVRVEHRVSSLQLLCQQTIASSLRDDKDISKLTLPPRLCSYLTTAFTPTIKPPI
PDPNNMRDFVSYPTSGNERLHCTMKRTEDDPEVGGPCYTLYLEYLGGLVPILKGRRISKL
RPEFVIMDPKTDGKADEVYGNSLISTMIDSCNCSDSSDIELSDDWAGKKSPKITRASKSP
KLPRINIEARKSPKLSRAAQEISRSPRLPIRKPSIGSPSLTRREFPLEDITQHNYLAQVT
SNIWGTKFKIVGLAAFLPTNLGAVIYKTSLLHLQPRQMTIYLPEVRKISTDYINLPVFNP
NVFSEDEDDLPVTGASGVPENNPPCTVNIPIAPIHSSAQAMSPTQSIGLVQSLLANQNVQ
LDVLANQTTAVATADHVADNAVHYPIPSRYSSPGQVIFGGVEMGRILQVPPQLPLPPQNA
IQMAIVDHRDGDRDHEHLQKAKALRPIPQVAEGDTAVFSTAQEIQLNKINPPPPYPGTIP
AAPTTAPPPPPPPPVPPQPPVDLCLKKGDFSLYSAAHYQTPLGYERITTFDSSGNVEEVC
RPRTRMVCAQNTYTLPGPGSSATLRITSSEKKIQQPCTSATLNRLTVPRYSIPTGDPPPY
PEIAAQLAQGRGITQRLDNSIIHATLRRNSREAALKMAQLVDSQRATLQFPLKLKSNVVG
AQYQQRVPTALYTCSQCSSNTNNGTSNTNNGNGNISNINASSGTSGLSTMRPDITTGSSS
QHNSVIAHSASTSPLASQSSYNLLNPLDNSRERTDYVNSAFMEDEALSQHCPVEKSARHV
PVAMAEPNIAVKRPPPYQWEPMMSEEIWVPQERTAHSTLPNPGKSNPLVIGQAQHLDISR
ATFVSPKSPTSPTATFQMSYGVGAPYLGNYSIPPPPLPPLQGMQVPCSPKEALAPSQIVQ
QEPSVVLQPAYPSNLSYCPLPPMYPGNSTCSSLQLPPMALHPWNSYSTCPPSVQSTQNVL
PPKALLVVDKSVMSPPPVEPPGHVGSDVMAETADNFQEVLSLTESPISQRTDKFGKKNRK
RLDSRADEGNMQAITEGKVKKEARTTLTDFNSLIASPRLGREKKKLKSQKDQLKSKKLNK
MNEFQDSSESEPELFISGDELMNQSQGSKKGWKTKRNLRTASELDEFKCRKANEKEDGRL
GNQGFVYVMANKQPLWNEATQVYQLDFGGRVTQESAKNFQIELEGRQVMQFGRIDGNAYI
LDFQYPFSAVQAFAVALANVTQRLK
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcagcagtggaacatggacctgttctcttcagcgattctaacatcctctgcctc
tcatggaaaggcagggttccaaaaagtgaaaaggagaaacctgtatgccggaggcgatat
tacgaggaaggctggttggccaccggaaatggcaggggagtagtgggcgttaccttcact
tccagccactgtagaaaggacagaaacacaccccagcgaatcaacttcaatttaagaggc
cacaacagtgaggtggttctcgtgcgatggaacgaacccttccagaagctggcaacttgt
gatgctgatggtggaatatttgtttggattcagtatgaaggcagatggtctgtggagctt
gtgaacgatcgtggagcacaggtgagcgattttacatggagccatgatggaacacaagca
cttatatcatacagagatggatttgtgctggttggatcagtcagtggacaaagacattgg
tcttcagaaattaacctggagagtcagatcacctgtggcatatggacacctgatgatcaa
caggtcttatttggtactgctgatggtcaggttattgttatggattgccatggccgaatg
ctggcacatgttcttcttcatgagtccgatggcatccttagtatgtcctggaattaccca
agtttcttggtggaagacagtagcgagagtgacacagattcagatgattattccccacca
caagatggcccagcggtatatccagtcctggttcagaacaccaaacagcttctcactgtc
agcttcacatcaggagatattagcttaatgaacaactacgatgatttatctcctaccacc
atccgctcagggttaaaagatgtagtggctcagtggtgcacgcaaggagacttgctggcc
gtagcaggcatggaaaaacttagccaactggccgaacttaacgctgcttcttttctgaaa
agtgcactcgtcaagttctacaatattcatggtgaacacatctacacgttggagacccct
gtacagcgccccataatctcaatttgctggggtcatagggactcacgtctgctcatggct
tctggccctgccctgtatgttgtccgagtagagcaccgagtgtccagcttacagctcctg
tgccaacaaacaatagccagctctttgagagacgacaaagatatcagtaaattaaccctg
cctcctcggctttgttcatacctaaccactgcctttacaccaacaatcaagcctcctatc
ccagaccctaacaatatgcgagattttgttagttacccaacatctggcaatgaaaggctt
cactgtacaatgaagcggacagaagatgacccagaagttggaggtccttgctatacattg
tatttagaatatttgggtggtctggtgcctatcttgaaaggtcgtcgaattagtaaactc
aggcctgagtttgtcatcatggatcctaagacagatggaaaagcagatgaagtctatgga
aacagcttgatttccaccatgattgatagctgcaactgctctgattccagtgatattgaa
ctgagtgatgactgggctgggaaaaaatctcccaaaatcactcgtgctagtaaatcaccc
aaacttcccagaattaatatagaagctcgcaaatctccaaaattatcacgagctgctcag
gagatatcaagatctcccagattaccaataaggaagccctccataggatcacctagccta
actcgtagagaatttcctttggaagacatcactcagcacaattatcttgctcaggtcaca
tcaaatatctggggaaccaaatttaaaatagtaggcttggctgcgttcctaccaaccaat
ctcggtgcagttatctataaaaccagcttgttgcatcttcagccaaggcaaatgaccatt
tatctcccagaagtgcggaagatttccactgattatatcaacctacctgttttcaatccc
aatgtttttagtgaagatgaagatgatttaccagtgactggagcatcaggagttcctgag
aacaatccaccttgcaccgtaaacatcccaattgctcctattcacagttcagcacaagca
atgtcaccaactcagagcatagggttggtgcagtctttgctagctaatcagaatgtgcaa
ctggatgtcctcgcaaatcagacaacagctgtggcaacagcagaccacgtggctgataat
gcagtccattatccaatcccaagcagatactctagcccaggccaagtgatctttggagga
gtagaaatgggacgtatcctccaggtccctcctcagttacccttgccaccccagaatgcc
atccagatggcaattgtggaccacagagatggggacagagaccacgaacacctccaaaaa
gctaaggctctgcgtcccatcccccaggtggctgaaggagacacagctgtcttcagcact
gcccaagaaattcaactgaacaaaataaaccctcctcctccataccccggaaccatacct
gcggctcctactacggctccaccaccaccaccacctcctccagtacctccacaacctccg
gtagatctctgtttgaaaaaaggtgatttctctctatattcagcagcccattaccagacc
cctctgggctatgagagaatcaccaccttcgacagcagtgggaatgtcgaggaggtgtgc
cgccctcgaacccggatggtgtgtgcccagaacacgtacactctgcccgggccaggcagt
tctgccactttacggattacttcatcagagaagaagattcagcagccatgcactagtgcc
accttgaacaggctcacagttccgcgttattccattccaacaggggacccacccccttat
ccagagattgcagctcagctagctcaaggccggggcatcacacagaggttggacaatagc
atcatccatgctacactgcggagaaatagtagggaggcagccctaaaaatggctcagttg
gtggacagccagagggccactttgcagttcccactgaaactgaagagcaatgttgtggga
gcccagtaccagcagcgagtgccaactgccctgtacacatgcagccagtgcagcagcaac
acgaacaatggcaccagcaacacgaacaatggaaatgggaacatcagtaatatcaacgca
agcagcggcacatcaggcctcagcactatgaggcctgatataaccacaggaagcagctct
cagcacaattcagtcattgcacactcagccagtacatcgcctttggcctcccaatcctct
tacaatttattgaacccacttgacaattctcgggagcggaccgattacgtaaactctgcc
ttcatggaggatgaggctctttctcaacactgccctgtggagaaatcagcacgccacgtc
cctgtagccatggcagaacctaacattgctgtaaaaaggccacctccctatcagtgggaa
cctatgatgagcgaggagatatgggttcctcaagaaaggacagctcatagtactttgccc
aaccctggtaaatccaaccctctagtcattggccaagctcaacatttggatatatcccga
gcaacctttgtttcccccaaatctccaaccagtcccactgccactttccagatgagttat
ggtgttggagcaccatatttgggaaattatagtatccctcctcctccacttcctcctctt
caaggaatgcaggtcccttgttctcccaaagaagctctggccccatcccaaattgtacaa
caggagccatctgttgttcttcagccagcctatccctcaaacctctcctactgccctttg
cctcccatgtatcctggaaatagtacttgttcaagtttacagctgccaccaatggccttg
catccatggaattcctatagcacatgcccaccttctgtccagagtacccagaacgttctg
ccacccaaggcgcttcttgtggtggacaaatctgttatgtctccaccaccagtagagcct
ccgggtcatgtgggctctgatgtgatggcagagacagcagataacttccaagaagtgctc
tccttgactgaaagtcccatttctcagaggacagacaagtttgggaagaagaatcgcaag
cgcctggatagccgagcggatgaaggaaatatgcaggctatcacagagggaaaagtcaaa
aaggaggccaggaccacattgactgacttcaattccctaatagccagcccaagactgggc
agggagaagaagaaactcaagagtcagaaagatcagctgaagtcaaaaaaactgaacaag
atgaacgaatttcaggacagctcagaaagtgagcccgaattgtttattagtggggatgaa
ctgatgaatcagagccaagggagtaaaaaggggtggaaaacgaaaaggaacttgaggaca
gccagcgaactggatgaatttaaatgtcggaaagcaaacgagaaggaagatgggcggctg
ggaaaccagggctttgtgtacgtgatggcaaataaacagcctttgtggaatgaggcaacc
caggtctatcagctggactttggagggagggtgactcaagaatctgcaaagaatttccag
attgagctggaaggaagacaggtcatgcaatttggacggattgatggcaatgcctatatc
ttggactttcaatatccattttcagcggtgcaggcctttgcagtagctttggctaatgtg
actcaacgtctgaaatga
DBGET
integrated database retrieval system
