Pituophis catenifer annectens (San Diego gophersnake): 139308807
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Entry
139308807 CDS
T11059
Symbol
IRF7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04620
Toll-like receptor signaling pathway
pcae04621
NOD-like receptor signaling pathway
pcae04622
RIG-I-like receptor signaling pathway
pcae04623
Cytosolic DNA-sensing pathway
pcae05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139308807 (IRF7)
04621 NOD-like receptor signaling pathway
139308807 (IRF7)
04622 RIG-I-like receptor signaling pathway
139308807 (IRF7)
04623 Cytosolic DNA-sensing pathway
139308807 (IRF7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139308807 (IRF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139308807 (IRF7)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
139308807 (IRF7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139308807
NCBI-ProteinID:
XP_070788765
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Position
Unknown
AA seq
605 aa
AA seq
DB search
MATPANKGNPKKVGFFDWLIEQINSGRYKGLLDWTDENHTTFRIRWKHNSKKNLVAHDNE
IFRAWAIYSKKYNEDKSAPSKWKINFRCAMNSTKRFEELVSNEPDFHKYRIIPLKPKTES
TANPSSGTSNGSDNEAEALHFSPYSEECPALHQSTQLHQYSQQNISPGSQLEIDAAFQTL
TLENGMLGSAVPNENAAGSFCQTNDDTLQWIIQQSQLNLTEMQHVSWAPTVPTDSSNHIG
NTILYEQTTSCEALQVTQNGCLPIGNGVVVEPVASNCYQEGLHWLPANPTNEISQSTVAF
PISHAQQNFPGANQFNQLEEAVCDTSCFVDNIYLNEEPQNNGMRNIEMRNDYPLIANQEV
MMEQSVFVPSATLPTDEPAINNVPSQDLLETATFNIKVSIYYHNKMQYEAEVNSCMFTYN
QENCHQPHNAQVIRFPNPEVLTDQKRVQHTLTVLNAASLLLYQKNGRIWAKRLGMCKVFH
AFSKELDNPQDPPCKLLQRNVETEIFNYEQFYRELVEFRDGQRRSSPDYTIYLCFGQRFT
AAKPKKSKLILVELVPNFCKHWHEFVQREGFSSLNSESVSLQISNSLFDMIEQLSSIIMQ
TEAAY
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaccagcaaataaggggaatccgaaaaaagttgggttttttgattggttgatt
gaacagatcaacagtggaagatacaagggtttgttggactggacagacgagaaccacaca
acttttcgtatccgttggaagcataattcaaagaagaatcttgtggcacatgataatgag
attttcagggcatgggctatctatagcaagaaatataatgaagataaatcagctcctagt
aaatggaaaatcaacttccgctgtgccatgaacagtacaaagagatttgaggaactggtg
tcaaatgaacctgactttcacaaatacagaatcatccccctaaaaccaaaaactgaatca
acagctaatccctcttctggtacaagtaatgggagtgacaatgaagctgaagcattgcat
ttcagtccatacagtgaagaatgtccagctctgcaccaatctacacagctacaccagtat
tcacaacaaaacatttcacctggttcacagctggaaattgatgctgcttttcaaactttg
acactggaaaatggaatgctaggttctgcagtgccaaatgagaatgcagcaggcagtttt
tgccagaccaatgatgatacactccagtggattattcagcagtcccaactgaatctgact
gaaatgcagcatgtctcatgggccccaacagtacctacagattccagtaatcatattgga
aatactattttgtatgagcaaacaacttcctgtgaagcccttcaggtcacccaaaatggc
tgcttacccatagggaatggagtagtggttgaacctgtggcaagtaactgttaccaagaa
ggactccactggctacctgcaaacccaacaaatgagatttcccagtcaactgttgctttt
ccaatatcgcatgctcaacaaaactttcctggtgcaaatcagtttaatcagttggaagaa
gctgtctgcgatactagctgtttcgttgataacatttatctgaatgaagagcctcagaat
aatggaatgagaaatattgaaatgaggaatgactatccacttatagcaaaccaggaagtt
atgatggaacagagtgtatttgtaccttcagctactctcccaacagatgaaccagccatc
aataatgttccttctcaggaccttctagaaactgccacatttaacataaaggtctctatc
tactatcataacaagatgcagtacgaagcagaagtaaacagctgcatgttcacctacaac
caggagaactgccaccaaccacacaatgcacaggtcatacggtttccaaatccagaagtg
ctgacggatcagaagcgagttcagcataccttgactgtcttaaatgctgcaagtttatta
ttatatcagaaaaacgggaggatctgggccaagcgacttggcatgtgtaaggtcttccat
gcattctccaaggagctggacaatcctcaggaccctccttgtaaattactgcaaaggaat
gttgaaactgaaatcttcaactatgaacagttctatcgagaactagtcgagttccgtgat
ggtcaaagacgctcgtctcctgactataccatttatctgtgctttggacagcggtttact
gctgccaaacccaagaagtccaaactgatcttggtggagctggttccaaatttttgtaaa
cattggcatgaattcgtgcagagggaaggcttctcatccctgaacagcgaaagtgtgagc
ctccaaatctccaacagcctctttgatatgatagaacagctttcttctataatcatgcag
actgaggcagcatattga
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