Pituophis catenifer annectens (San Diego gophersnake): 139309654
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Entry
139309654 CDS
T11059
Symbol
THOC3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
pcae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139309654 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
139309654 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139309654 (THOC3)
03041 Spliceosome [BR:
pcae03041
]
139309654 (THOC3)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
139309654 (THOC3)
Spliceosome [BR:
pcae03041
]
Complex C
Other components
EJC/TREX
139309654 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139309654 (THOC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
DSE1_N
eIF2A
Beta-prop_TEP1_C
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
RMC1_N
Tricorn_2nd
WDR90_beta-prop_4th
PAC11
Beta-prop_ACSF4
TRM82_WD
Beta-prop_SPT8
Beta-prop_WDR75_1st
B-prop_COPA_B_2nd
PD40
ASA1
Beta-prop_NUP159_NUP214
Beta-prop_EIPR1
Peptidase_S9_N
Beta-prop_WDR41
Me-amine-dh_H
Beta-prop_Nup120_160
Beta-prop_LRRK2
Cytochrom_D1
CNH
YNCE
TP_0598_N
WD_LRWD1
PROPPIN
Beta-prop_WDR11_1st
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
139309654
NCBI-ProteinID:
XP_070789907
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MAVSPYVKDMQEKFRANTRSREFPAHGAKVHSVAWSCCGHRLASGSFDKTASVFVLDKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIDTVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSCDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKHPLLAYACDD
KDGKYDSSREAGTVKLFGHANDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttctccttacgtgaaggacatgcaggagaagttccgggctaacacgcggagc
cgcgaattccctgcgcacggggccaaggtccactcggtggcctggagctgctgcggtcac
cgtttggcctccggctctttcgacaagaccgccagcgtcttcgtgctggataaagaccgg
ctggtcaaggaaaacaattaccgtggtcatggagatagtgtggatcagttgtgttggcat
cctagtaacccagatctatttgttacagcatctggtgataaaaccattcgtatatgggat
gttcgaaccactaagtgcattgacacagtgaatacaaaaggagaaaacattaacatctgc
tggagtcctgatggccagactattgcagtagggaataaagatgatgttgtcacattcatt
gatgctaagacacatcggtccaaagctgaagagcaattcaagtttgaggtgaatgagata
tcttggaacaatgacaacaacatgtttttcctcaccaatggcaacggatgcatcaacatc
ctcagttacccagagctgaaacccattcagtcaattaatgcccacccctcaaattgcatt
tgtatcaagtttgatccaacaggcaagtattttgctactggaagtgctgatgcattggtt
agcctctgggatgtggatgagctggtatgtgtacgatgcttttcgagacttgattggcct
gtgaggactttgagctttagctgtgatggcaagatgctggcttcagcctctgaagatcac
ttcattgatattgctgaagtagaaactggggagaagctctgggaagtacagtgcgagtcc
ccaaccttcacagttgcttggcatccaaaacacccactattagcctatgcttgtgatgat
aaagacggcaaatatgatagcagtagagaagcgggcactgtgaagctctttggtcacgcc
aatgactcttga
DBGET
integrated database retrieval system
