KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139309686
Entry
139309686         CDS       T11059                                 
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    139309686 (RBM22)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pcae03041]
    139309686 (RBM22)
Spliceosome [BR:pcae03041]
 Complex B
  Other components
   Prp19-related factors
    139309686 (RBM22)
 Complex C
    139309686 (RBM22)
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 Nup35_RRM_2 RRM_occluded zf-CCCH_2 zf-CCCH RRM_3 zf-CCCH_4 RRM_YTH1 zf-CCCH_3 zf-CCCH_10 zf-CCCH_12 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 139309686
NCBI-ProteinID: XP_070789968
LinkDB
Position
Unknown
AA seq 421 aa
MATSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDDMPKSDVNKEYYTQN
MEREIMNSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLG
DTITESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKEREGTTESGLKLEPVPGLPGALPPPPAAEEEAASANYFNLSPSGPPA
VVNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHNN
P
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgacgtctctgggatccaacacgtacaatcggcagaactgggaggatgcggatttc
cctattttgtgccagacctgccttggagaaaacccctatatccgaatgaccaaagaaaaa
tatggaaaagaatgcaagatctgtgccaggccattcacagtttttcgttggtgccctggt
gttcgtatgcgttttaagaagactgaagtgtgccaaacatgcagcaagctgaagaacgtt
tgtcagacttgccttcttgacttggaatatggtttacctattcaggttcgtgatgctgga
ctctcacttaaagatgatatgcccaagtctgatgttaataaagaatattacactcaaaat
atggaaagagagatcatgaattcagatggcactcgacctgttggtgctcttggaaaggca
acatctaccagtgacatgctgctaaaattggcacggaccaccccttattacaagcgcaat
cgccctcatatttgttcattctgggttaaaggagaatgtaaaaggggagaagagtgtcct
tacagacatgaaaagcctacagatccggatgatcctcttgcagatcagaacattaaagat
cgctactatggtataaatgatcctgtggctgacaagcttctcaagcgagcttctacaatg
cctcgactagacccccctgatgacaagaccattacaaccctgtacgtcggtggtctaggc
gatactatcactgagtctgatcttaggaatcacttctatcagtttggtgagatccggaca
ataacagtggtccagaggcagcagtgtgcatttatccaatttgctactcgacaagctgca
gaagtagcagcagaaaaatccttcaacaaactcattgtgaatggccgcaggcttaatgtg
aagtggggcaggtctcaagcagccagggggaaagagaaggaacgagaagggactacagaa
tctggtctaaaactggaaccagttcctggtctacctggagctcttccacctcctcctgca
gcagaagaggaagcagcttctgcaaactatttcaatctatctcccagtggccctccagct
gttgtaaacattgcccttccgccaccacctggcatcgcgccgccgccaccaccaggtttt
gggccacacatgtttcatgcaatgggacctccacctcctttcatgagggctccaggcccc
atacattatccttctcaagatccacaaagaatgggtgcacatgcaggaaaacacaataac
ccctaa

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