Pituophis catenifer annectens (San Diego gophersnake): 139309726
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Entry
139309726 CDS
T11059
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
139309726 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139309726 (IRF1)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
139309726 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
139309726
NCBI-ProteinID:
XP_070790029
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MPQTRMRMRPWLELQINSNKIPGLYWLNKKDKMFQIPWKHAAKHGWELEKDACLFKNWAV
HTGRYKEGDVEPDPKTWKANFRCAMNSLPDIQEVKDQSISKGPSAVRVYKIVELPVKSEK
KEKKSRSPKSKSPRKSVEDIKEETVEATNSIQLPDDHSGYVLPGYVAEDMEVGSTFDLSC
DMNSSPWRNCPLEIQTPDSTNNIYRLQVSPSYSSSEEEDIPLYDLFNSSEWQQSSIGGKG
FLLNEAGIGKGFLLNESGMQNLSLDFTLQEQDTTFEIPKLEVIPHELKPSAECTLLDIRT
HYVPRISCGI
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaaggatgcgcatgagaccttggctggaactgcagattaattcaaataaa
attcctggactttattggctcaataagaaagataaaatgttccagatcccttggaaacat
gcagctaagcatgggtgggaactggaaaaagatgcctgcctgttcaaaaattgggccgtt
catactgggagatacaaagaaggtgatgtagaacctgatccaaaaacatggaaggcaaat
ttccgttgtgccatgaattccttgcctgacattcaagaagtgaaggatcaaagcattagc
aaaggacccagtgctgttcgagtctataagatagtggaactcccagtaaaatcagagaaa
aaagaaaaaaagtcaaggtctccaaaaagcaagagcccaagaaagtcagtggaggatatt
aaggaagagacagtcgaagcaacaaacagcattcagttgcctgatgaccacagtggctat
gtgcttcctggctatgtagcagaggacatggaagtggggagcacatttgatctttcatgt
gacatgaacagtagtccctggagaaattgcccactggaaattcagacccctgacagtaca
aacaacatatacagacttcaggtttcaccatcctattcttcttctgaagaggaggatatt
ccactgtatgatctctttaatagctctgagtggcaacaaagcagcattggtggaaaaggg
ttcctgttaaatgaagctggaattggaaaagggttcctgttaaatgaatctggaatgcag
aatctctcccttgactttactttgcaagagcaagatactacctttgagataccaaagcta
gaagtaattccacatgagttgaaacccagtgcagaatgcactttgttggacattcgaaca
cactatgtaccccgtatatcctgtggcatttaa
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