Pituophis catenifer annectens (San Diego gophersnake): 139310108
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Entry
139310108 CDS
T11059
Symbol
BMAL1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcae03000
]
139310108 (BMAL1)
Transcription factors [BR:
pcae03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139310108 (BMAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
139310108
NCBI-ProteinID:
XP_070790369
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MADQRMDISSTISDFMSPGPTDLISSSLNSSGMDCNRKRKGSSTDYQLDGFSFDEGMDTD
KDDQHGRLEYTDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLT
VLRMAVQHMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVS
ESVFKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDIT
PGPSRLCSGARRSFFCRMKCNRPSVKVEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPP
TKMGLDEDNEPDNEGCNLSCLVAIGRLHPHVVPQPLNGEIRVKPTEYVSRHAIDGKFVFV
DQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQSREKISTNCYKFKVKDGSF
ITLRSCWFSFMNPWTKEVEYIVSTNTVVSANMLDGGDTSFSQLAASPHSMDSVLQAGEGG
PKRALPTVPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNMTSTPPPDTS
SPGGKKILNGGTQDIPPASILPGQIQDNPAYPYSDNNSILGENSHIGIDMIDNDQGSSSP
SNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaaggatggacatttcctctacgatcagtgattttatgtcacctggtccc
actgatttgatctctagttctcttaactcttcaggaatggattgtaacaggaaaaggaaa
ggaagttctactgattaccagctcgatgggttttcttttgatgaaggcatggatacagat
aaggatgatcaacatggaaggttggaatatacagaccaacagggcagaataaaaaatgca
agagaggctcacagtcagattgaaaaacggcgacgtgataagatgaacagctttattgat
gaattggcttctttagtgccaacatgcaacgctatgtccagaaagctagataaacttact
gttctgagaatggcggttcagcacatgaagactttacgaggtgctacaaatccatacact
gaggcaaactacaaacctacttttctctcagatgatgaattaaagcatctaattcttagg
gcagcagatggctttctcttcgttgtgggttgtgacagagggaagatactctttgtttca
gaatcggtcttcaaaattctgaattatagtcagaatgatctgattggccaaagcctgttt
gattacctgcatcctaaagatattgccaaagttaaggaacaactctcttcttcagatact
gccccacgggaaaggctcatagatgcaaaaactggacttccagtcaaaacagatattaca
cctgggccatcacgactgtgttctggagcaagacgatcgttcttttgtaggatgaagtgc
aatagaccctccgtgaaagtagaagacaaagactttccttccacctgttcgaaaaagaaa
gctgatcgcaaaagcttttgtactatccacagcacaggatatttaaaaagctggccacca
acaaaaatgggactagatgaagacaacgagcctgataatgaaggctgtaacttaagttgt
cttgttgcaattggacgtttgcatcctcacgtagttcctcaaccattaaatggagaaatc
agggttaaaccaacagaatatgtttctcgacatgcaattgatggcaaatttgtgtttgta
gatcagagggcaactgcaattttggcatatttaccacaggagcttctaggcacatcatgt
tatgaatattttcatcaagatgatataggacatcttgcagaatgtcatcgacaagtttta
cagtcaagagagaaaatcagtactaattgttacaagtttaaagtcaaagatggatctttt
attacactgaggagttgttggttcagtttcatgaacccttggaccaaagaagtagaatat
attgtctcaacaaacacagtggtttctgctaatatgcttgatggtggagatacgtctttt
tcacaactagcagcttcacctcacagcatggatagtgtactccaagcaggagaaggtggt
ccaaaaagggcccttcccacagttcccggtattccaggtggaacgagagccggtgctggt
aaaattggaaggatgattgctgaagaaataatggagatccataggattcgaggatcttcc
ccttcaagttgtggctctagcccattgaacatgaccagcacacctccccctgatacttca
tcaccaggaggcaaaaagattttgaatggtggaacacaagacattcctcctgccagtata
ttgcctggccagatacaagacaatccagcctatccctattctgacaacaactccattctt
ggggaaaactcacatataggcattgatatgatagacaatgaccaaggatccagcagcccc
agcaatgatgaggcagcaatggcagttatcatgagccttttggaagcagacgcagggctt
ggtggcccagttgattttagtgacttaccatggcccttatag
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