Pituophis catenifer annectens (San Diego gophersnake): 139310202
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Entry
139310202 CDS
T11059
Symbol
COL7A1
Name
(RefSeq) collagen alpha-1(VII) chain
KO
K16628
collagen type VII alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139310202 (COL7A1)
BRITE hierarchy
SSDB
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Paralog
GFIT
Motif
Pfam:
Collagen
Kunitz_BPTI
Motif
Other DBs
NCBI-GeneID:
139310202
NCBI-ProteinID:
XP_070790465
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MTSQITGEQGPSGRPGPSGRDGERGEPGIPGLPASSISGIKGDKGERGIIGPEGPPGLRG
DAGDKGERGPPGLSVPGPPGPKGEQGENGLTGLAGKIGPKGDPGEPGERGESGRPGPAGP
TGPRGKEGERGDKGEEGISGEPGLSGKPGEKGPRGPPGIRGLPGEKGDQGDPGEDGRNGS
PGPSGSKGDRGSPGEPGPPGQTVGVGPGEGGQKGEKGEPGDPGEDGMKGTKGEVGLPGLP
GERGIEGARGVPGVRGDPGDRGPVGEKGDRGPPGLDGRNGLDGKPGQIGPLGQRGDPGKQ
GDPGRDGLQGHRGEQGPPGAIGPPGSPGLPGKSGEDGKPGLNGKNGEDGIPGEDGRKGEK
GESGTPGKEGPEGVKGERGTSGPPGPPGPSGVPGVPGQVGPPGQSLPGLPGISGHKGERG
EPGFKGDQGRNGEPGPRGEPGTASNVERALEAHGIKISLLREITGAYDGSSDQLLPVPDR
RRGLKGERGDPGERGPPGKEGLIGFPGERGAKGDKGNEGPQGPPGRAIGEQGPRGSPGQS
GEPGKPGIPGLPGRAGELGEAGRPGEKGDRGEQGAKGEQGRDGPPGPPGPPGPKVDSAIE
GSVSGFPGERGPIGPKGSKGSPGEDGVKGSRGDKGEDGQKGERGEAGEKGRDGTPGLPGE
RGLPGSEGKAGLQGIRGPPGPAGNSGDPGSPGPPGPIGPPGTQGIPGIKGDVGEPGSSTR
GMPGPPGNVGFPGPTGSPGPVGPQGPPGLPGQVGEPGKPGVPGRDGVSGKEGESGLPGKM
GIPGPSGPAGPKGEPGDAGSPGQTIVGPPGVKGEKGESGDFDEELLEKLGLKGDRGIPGP
RGEKGNLGSSGIPGDPGEDGAKGSPGIKGEKGSVGIGIQGPPGQDGPQGLKGDPGLPGPP
GPPGSPGAVGTPGQPGLRGENGMTGQPGPPGERGLIGFPGRDGTAGSPGPPGPPGSPGTS
GTPGVKGDKGDIGIGQPGPRGERGDPGTRGEDGRPGLEGDRGPAGPPGNRGERGDKGDIG
LMGLKGDKGDTVIVEGPAGLRGNKGEPGERGLKGMEGEKGDKGDHGIIGEKGVKGEQGEK
GSTGFPGARGPSGQKGEIGKSGEPGEPGQSGKDGIPGTRGEKGEMGPIGMRGPKGDRGMK
GACGQDGDKGEKGEPGLPGRMGLIGKKGDPGEIGMPGIPGIPGKEGLIGPKGDRGFDGQK
GSRGDQGEKGERGTPGIIGSPGPVGNDGPPGPPGPPGNIGPKGPEGIQGQKGERGPAGER
VVGAPGPPGITGERGEQGSPGLDGLRGEKGVSGMTEEEVRQFVRQEMSQHCACGSQFSVS
ERRNLPNDPSTHPYPSVKGQIIPVLKLSHAEEEEGSQERNILKASRPEYEYIYTEEDYEE
GLIADGTESPMLRDADLCTLPLEEGGCSKLTLKWYYNQRVLECRPFIYSGCGGNSNRFSS
KEDCELYCKPQADTGAVEVQLYD
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacagatcactggagaacaaggtccctcaggccgtcctggtccatctggcaga
gatggagagagaggagagcctggtatacccggtctgccagcatccagcatttctggaatc
aaaggagataagggagaaagaggcattataggacctgaaggtccacctggacttagagga
gatgctggggacaaaggagaacgtggacctcctggtcttagtgtccctggcccacccggc
ccaaaaggagaacaaggagaaaatggactcacaggactggctggcaaaattggcccaaag
ggtgatccaggagagccaggggagagaggagagtcaggaagaccaggtcctgcaggacca
accggcccacgaggaaaagagggtgaaagaggtgataaaggagaggaaggaatctctggt
gagccaggcctatctgggaaacctggagagaaaggtccacggggtccgccaggcattaga
ggccttcctggtgagaagggagaccagggagacccaggtgaagatgggagaaacggcagc
cctggaccatcagggtcaaagggtgatcgagggagtcccggagagccgggtcctccaggc
caaactgttggtgtgggacctggagaaggagggcaaaaaggtgaaaagggggagccagga
gaccctggagaggatggcatgaaaggaacaaaaggagaagttggtttacctggcctgcca
ggagaacggggaattgaaggtgccagaggggtccctggagttcgtggtgaccctggagat
cgaggcccagtaggagagaagggtgatcgaggtcctccaggcctggatggtcggaatggc
ttggatggaaaacctggacaaataggtcctttaggccaaagaggtgatccaggaaagcag
ggtgaccctggtcgagatggcttgcaaggtcatcgtggagagcaaggtcctcctggagca
attggcccaccaggatctccaggactgcctggcaaatctggtgaagatggcaaacctggg
ctgaatgggaagaatggagaagatgggatcccaggagaagatgggagaaagggggagaaa
ggtgaatctggaacacctggcaaagaaggtcctgagggtgttaaaggagagagaggaacc
agtgggcccccagggcctccaggaccatcaggtgttcctggcgtgcctggacaagttggt
ccaccaggccagagtttgcccggcctccctggaatatctggccacaagggagaaagagga
gaacctggattcaaaggagatcaggggagaaatggtgaacctgggccacgaggcgaacct
gggacagcatcaaatgttgaacgcgccctagaagcacatggtattaagatttccctgctc
cgagagatcactggtgcttatgacggcagctcagatcagctactgcctgtccctgaccgc
cggagaggactgaagggtgagagaggagatccaggagaaagagggccaccagggaaggag
ggtctcataggcttccctggagaaagaggagcaaaaggagataaagggaatgaaggacca
caaggaccaccaggacgtgccattggagagcaggggccaagaggatcacctgggcagtca
ggggagcctgggaaacctggaattccagggctgccaggccgggcaggagaacttggagaa
gcagggaggcctggagagaaaggtgacaggggtgagcagggtgcaaaaggagaacagggt
agagatggcccaccaggtcctccaggcccaccaggacccaaggtagattcagcaatagaa
gggagcgtctctggatttcctggggaacgtggacctataggacccaagggaagcaaggga
agcccaggagaagatggtgtaaagggctccagaggcgataagggtgaagatggtcaaaaa
ggggagagaggtgaagctggtgaaaagggcagggatggcactccaggacttccaggagag
agaggccttcctgggtcagaagggaaagcgggcttacagggtattagagggccccccggc
ccagctggaaattcaggggatcctggatcaccaggccctcctggtcctatcggcccacct
ggcactcaaggcatacctggaataaagggagatgtaggagaacctgggtccagcacacga
ggtatgccaggccctccaggaaatgtgggattcccaggaccaacaggatctcctgggcct
gtgggtccacagggccctccagggttaccaggacaagtgggtgagccagggaaaccaggt
gtaccaggaagagatggagtgtctggaaaagaaggggagtctggactgcccgggaaaatg
ggtattccagggccttcaggacctgctggtcctaaaggggagcctggagatgctgggtcc
ccaggacagactatagtagggcctcctggagtgaaaggtgaaaagggtgaatcaggtgat
tttgatgaggaacttctggagaagctaggtctcaagggtgatcgaggcataccaggtcct
cgtggagagaaaggtaatcttggaagttcggggatacctggagatcctggagaagatgga
gccaaaggatcacctgggatcaaaggagaaaagggttcagttggaattggcatccaggga
cctcctggacaggatggacctcaaggcttaaagggagatcctggtttacctggcccacca
ggcccaccaggttcaccaggtgcagttggaactcctggacagcctggtctgagaggagaa
aatggaatgactggccaacctggacctccaggagagaggggtttgattggcttcccaggg
agagatggtactgcagggtcaccaggacctccaggacctccagggtcaccaggtacttca
ggcactccaggagtaaagggtgacaagggggacataggtattggacaaccaggacctaga
ggagaacgaggagatcctggaactcggggtgaagatgggcgcccaggtctggagggagat
cgagggcctgctggccctcctggaaacagaggggagagaggtgacaaaggcgacattggg
cttatggggctgaaaggagacaaaggagatactgtcattgtggaaggcccagcaggtctc
cgagggaacaaaggagaaccaggagaacgtggcctaaaaggaatggaaggggagaagggt
gacaaaggagatcacggaatcattggagagaagggagtaaagggtgaacaaggtgagaaa
ggatccacaggcttccccggtgcacgaggacccagtgggcaaaagggagaaattggtaaa
tcaggagaaccaggagagccgggtcaatctgggaaggatggtattcctggaaccagaggg
gagaaaggagaaatgggacctattggaatgcgaggcccaaagggtgatcgaggaatgaaa
ggagcctgtggccaagatggagataagggtgagaagggagagccgggattaccaggccga
atgggccttattggaaaaaagggtgatcctggagagattggcatgcctgggataccagga
atccctgggaaggaaggcctcattggtccaaagggtgacagaggatttgacggccagaaa
ggatccagaggcgatcagggagaaaagggggaaaggggtactccagggattataggttcc
ccaggacctgtgggaaatgatggaccccctgggccacctgggccacctggcaacattggc
cccaaaggtccagaaggaattcaagggcagaaaggtgaaagaggccctgctggtgagaga
gttgtaggagctccaggaccaccaggcataactggagaaagaggagaacagggaagtcca
ggacttgatggcttaagaggagaaaaaggagtatctggcatgacggaagaagaagtccgc
caatttgtcaggcaagagatgagtcaacattgtgcttgtggaagccagttctctgtttct
gaacggcgtaatctccccaatgatccatccacccacccatacccatctgttaaaggtcaa
ataatccctgtgcttaaactgtctcatgctgaggaagaggaagggagccaggaacgaaac
atattgaaagcgagcaggcctgagtatgagtatatctatacagaggaagactatgaagag
ggcctgatagcagatggaacggagagtcctatgttgagggatgctgacctgtgcaccttg
cctctggaagaaggcggatgcagcaaattaaccctaaaatggtactataaccagagagta
ttggaatgtcggccctttatctacagtggctgtggaggaaattccaaccgcttcagctcc
aaagaggactgtgagctttactgcaagccccaggcagatacaggagcagtagaagttcaa
ctttatgattaa
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