Pituophis catenifer annectens (San Diego gophersnake): 139310342
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Entry
139310342 CDS
T11059
Name
(RefSeq) interferon epsilon-like
KO
K05414
interferon alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04060
Cytokine-cytokine receptor interaction
pcae04217
Necroptosis
pcae04620
Toll-like receptor signaling pathway
pcae04621
NOD-like receptor signaling pathway
pcae04622
RIG-I-like receptor signaling pathway
pcae04623
Cytosolic DNA-sensing pathway
pcae05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
139310342
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
139310342
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
139310342
04621 NOD-like receptor signaling pathway
139310342
04622 RIG-I-like receptor signaling pathway
139310342
04623 Cytosolic DNA-sensing pathway
139310342
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139310342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pcae04052
]
139310342
Cytokines and neuropeptides [BR:
pcae04052
]
Cytokines
Interferons
139310342
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Interferon
Ins_allergen_rp
Borrelia_P83
Motif
Other DBs
NCBI-GeneID:
139310342
NCBI-ProteinID:
XP_070790600
LinkDB
All DBs
Position
Unknown
AA seq
202 aa
AA seq
DB search
MPTMTTRYWCLFICLGIFFTEISSQDCNQLRSRLHEANLGNLNVLMRNMGSTIPQQCIRD
IIDFSLYTSEENLMNMVNELQGENAKVAIKELLQQIDLIFKESHSELAWDENSLREFHIG
LDQEIKNTEACWNTEVERGTRSPRSQKRQFTRLRVKRYFQRLRDFLKNKEYNLCAWKIIQ
IQIRECFELINQLNQRIPSEGT
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgcctactatgaccacaagatattggtgcctattcatttgcctagggatcttcttcact
gaaatttcatcccaggactgtaaccaacttcgcagtaggctacatgaagccaacttgggc
aacctgaatgtcctaatgagaaatatggggtcaaccattccccaacaatgtatcagggac
ataatagatttctcactctataccagtgaagaaaatctgatgaacatggttaatgaatta
cagggggagaatgccaaagtagctatcaaagaacttctccaacagatagacctcatcttc
aaggaaagccatagcgaattggcttgggatgagaactcattaagagaattccacattgga
ctggatcaggagataaagaacacagaagcttgctggaataccgaggtggaacgtggcacc
agatctccaagaagtcagaaacgacagttcaccaggctgagagtgaaaagatattttcag
agactcagagacttcttgaaaaataaagagtacaatctgtgtgcctggaagattatccag
atccaaatcagagaatgttttgagttgattaaccaactcaatcaaaggattccaagtgaa
ggtacttag
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