Pituophis catenifer annectens (San Diego gophersnake): 139310488
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Entry
139310488 CDS
T11059
Symbol
EME1
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03440
Homologous recombination
pcae03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139310488 (EME1)
03460 Fanconi anemia pathway
139310488 (EME1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139310488 (EME1)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
139310488 (EME1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EME1-MUS81_C
ERCC4
Motif
Other DBs
NCBI-GeneID:
139310488
NCBI-ProteinID:
XP_070790752
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MKLNVMFSELDESDCEELPVFFSENKPPPDPQNSIRPSPENQVVVLFSSDSEDSFLCSPA
RKKPYGPCNSVKMASSTDVRLQLSSESEEEEEEMLVPLAERLQRKLLVAGPSITAPSFTR
IQTKSGHESTGQNRPCVSDEELVPACWQKPLPAGSDLQENVAPSTWELSDGDQELSSWDA
KPQSLPQIPVCIPDNKIQDGTRQICLKSFPLQTSTRQNHQGLDKACQAALQKSKEQGSQK
QLQEQEKQRKAALAQLLKAQRPEQCLKHIQIVLDPGLLQINGADEILAALQSMESSYVIE
SQTVPCSITWRRKTGLTQAEEDNWIEEPNVLVPVLLPDFIAMIHNGKQARMEGPTETLQS
FVAKITEKIPGKTLSLAVTELEKHFSSQKPTSHKKLQQAEQSSSKAQEEGKPRKRKEKAT
PVSQLSRLDVEEALVELQLHTGVQVQVLASWKEFGEFASMFTKAVAEAPFKKEKNKTSFS
FCLEGDWCRGVKVDRTGKGLLQVWKRQIQQFNRVSLEMANAIVARYPSPLLLMQAYDSHT
SEQERHNLLAEVPIRRGDGVTTTMRRVGPDLSKRIYLQMTSCNPDLSLDVTG
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaaacgtcatgttctcagaactggatgagagtgactgtgaggagctaccagtt
ttcttttctgaaaacaaacctcctcctgacccacaaaacagcattcgaccttctcctgag
aaccaagtagttgtgctcttcagctcagactcagaggattcattcctttgctcacctgcc
aggaaaaagccctatggtccgtgcaattcagtcaagatggcttcttctacagacgtgaga
ctgcagctcagtagcgagagtgaggaggaggaggaggaaatgcttgtccccttagccgaa
aggctccaaaggaagttgctggtagctggaccctctataactgctccttcatttactagg
atccaaacaaagagtggccatgagtccactgggcaaaataggccctgtgtcagtgatgaa
gaattggtgcccgcttgctggcagaagccactacctgctggctcagatctccaagaaaac
gtggcacccagcacttgggaactttcagacggtgatcaggagctatcttcatgggatgct
aagccacaatccttgccccagattccagtttgcatccctgataataagatacaggatggt
acccgtcaaatatgcctgaagtcctttcctcttcagacaagtacgagacagaaccatcag
ggtttggacaaagcttgccaggctgccctgcagaagagcaaagagcaaggatcacagaaa
cagctgcaggagcaagaaaaacagaggaaagcagctttggcccaacttctcaaagctcaa
agaccagagcagtgtctgaaacacattcaaatagtattagacccaggtcttttacagatt
aatggtgcggatgagatccttgctgctttgcagtcaatggagagtagctatgtgattgag
agccaaactgtgccctgcagcatcacctggagaaggaaaacaggcctaacacaggctgaa
gaggacaactggatagaagaacccaatgtcctagtgccagtgctgctcccagacttcatt
gcaatgattcataacggcaagcaggctaggatggaaggtcctactgaaacactgcagagt
tttgtggcgaaaatcacagagaaaattcctgggaaaacgctgtcattggcggtaacagaa
ctagaaaaacacttcagttctcagaaacccacgtcacacaagaagctgcagcaagcagag
caaagtagcagcaaggcacaggaggaaggcaagccaaggaaacggaaagaaaaggcaact
ccagtttctcagttgtctagactagatgtggaagaagctttggtcgagctgcagcttcac
acaggtgtccaggttcaagtgcttgcaagctggaaggagtttggagaatttgctagtatg
ttcacgaaagctgtggctgaagccccattcaaaaaggaaaaaaataaaaccagcttctcc
ttctgcctcgagggagactggtgtagaggtgtgaaggtggatcgtactggaaagggactg
cttcaggtatggaagagacagattcagcaattcaaccgagtcagtctggagatggccaat
gccattgtagcccggtacccttctcctctgcttctgatgcaggcttatgatagtcacact
tcagagcaggagcgacacaatcttcttgcggaggttcccatccgtcgtggagatggagtg
acaacaacgatgaggcgagttggtccagacctctccaaacggatttatttgcagatgact
tcttgtaaccctgacctctccctggacgttactggttga
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