Pituophis catenifer annectens (San Diego gophersnake): 139310490
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Entry
139310490 CDS
T11059
Symbol
CHAD
Name
(RefSeq) LOW QUALITY PROTEIN: chondroadherin
KO
K06248
chondroadherin
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04510
Focal adhesion
pcae04512
ECM-receptor interaction
pcae04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139310490 (CHAD)
04518 Integrin signaling
139310490 (CHAD)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139310490 (CHAD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcae00535
]
139310490 (CHAD)
Proteoglycans [BR:
pcae00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
139310490 (CHAD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRRNT
LRR_9
LRR_NXF2
LRRCT
Motif
Other DBs
NCBI-GeneID:
139310490
NCBI-ProteinID:
XP_070790756
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MKRENQASFFSLLDVKGLKSHXVLENSYFQVSIWLLLWLVGRILLFNSIINRAVFNMQQT
YFLFHSTFSLLLHVYHSSVGMDPSNVLLKFIALLTCLLPVLQACPQNCHCHGGDLHHVIC
DNVGLRRIPKVAEQTRLLNLQRNNFPVLPTNSFREMKNLVSLHLQNSHIKEISSRAFRGL
KQLVYLYLSNNDISTIKMGAFDDLTELTYLYLDHNKISDLPKGLLSPLINLFILQLGNNR
LRELRSGAFHGTKNLRWFYLSNNSISSIQPGALEDVENLAIFHLDKNQLSSYPVAAMSKL
RVVEDLKLSNNPIKSIPDLAFQSFGRYMETLSLDNMGLEKFSDKAFVGTTALKNVHIEHN
KISSLPRSFPFTRLETLSLSNNPWHCSCQLAPLRRWLGSTRTRPDAVCASPPQTRGQQIR
DTAALRSCKLPSKRSKKGNRH
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagaaaatcaggcatcctttttctctctgcttgatgtcaaagggttaaagtca
cactaggttcttgaaaacagttacttccaagtcagcatctggctactgctgtggttagtg
ggaaggattttgctttttaatagcattataaatagggctgtgttcaacatgcagcagact
tactttctctttcattcaaccttctccctcctcctgcatgtctaccacagctctgtaggc
atggacccatcaaacgtcttgctcaaattcatcgccttgcttacatgccttcttcctgtt
cttcaggcctgtcctcagaattgtcactgtcatggaggagacctccaccatgtcatttgt
gacaatgttggattgagaaggattcccaaggtagctgagcaaacccggcttctcaatctg
cagaggaacaatttccctgtgctgccaaccaacagtttcagagagatgaaaaatcttgtc
tctcttcacctccaaaattcccacatcaaagaaatctccagtagagctttccgcggcctg
aagcaactggtctacctttacttgtcaaataatgacatcagtaccataaagatgggagcc
tttgatgacctgacagaacttacttacctctacctagatcataacaagatatctgacctg
cccaaggggctcctctctccactgattaatcttttcatcctgcagctaggtaacaacagg
ctccgagagctgagatcaggagccttccatggtactaagaaccttcgctggttctatctc
tctaataactcaatctcctccatccaacctggggccttggaagatgtggaaaacctagcc
atattccacttggataagaaccagctaagcagctaccctgtggctgccatgagcaaatta
agggtggtggaagacctgaagctctcaaacaacccaataaagtccattccagatttagcc
ttccaatcttttggacggtacatggagactctcagcttggacaacatgggattagaaaag
ttttcagataaagcatttgttgggacaactgcactgaagaatgttcatatagagcacaac
aaaatttccagtcttcctaggagctttccattcacccgtcttgagacactctccctgtcc
aataacccttggcattgttcttgtcagttagcacctttgcgcagatggctgggatctact
cgtactcgcccagatgcagtctgtgcatcacctcctcagactcgaggacagcagattcga
gacactgctgcgctccgtagctgcaaacttccctctaagagatccaaaaaaggaaatcgc
cattaa
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integrated database retrieval system
