Pituophis catenifer annectens (San Diego gophersnake): 139310514
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Entry
139310514 CDS
T11059
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcae02000
]
139310514 (TMC6)
03037 Cilium and associated proteins [BR:
pcae03037
]
139310514 (TMC6)
Transporters [BR:
pcae02000
]
Other transporters
Pores ion channels [TC:
1
]
139310514 (TMC6)
Cilium and associated proteins [BR:
pcae03037
]
Other cilia and associated proteins
Stereociliary proteins
139310514 (TMC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
139310514
NCBI-ProteinID:
XP_070790786
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MSHTVSFTFQDFENGEPTSQDLSPYDEGAVHDSFHQLIKEQSSLAEQELVEMQDLTTRSK
ENLVHPSDPTGTWNPYARLVEHPDFSSTTLRILANMPSRTIGRSRGAILSQYCNRTARRR
RRSNRAPLQEVSRSARPSFRELSLELDSSYREEDPKYILLVKELQNLPVHQRNHMLQMMP
LSLAEKRRLRQDSSGHSGTLRKPKPTGRLSYCSWIKYHILIGFRNFWYNLLSFIPILQPW
HYSLKKISGRFGSSILSYFLFLRTLLFFNLFMFLILLVFVVAVQAAFPSAIPNNVAFTGS
ELLTGAGYFSHTVMYYGYYSNFTLNAPDASEANSTHYRQHTHSQMSYNMPLAYLFVTGSA
FFGICFLLIYSLSHSFGESYRVGSASSNLAVKVFCSWDYKVIQKRSVQLQSENIRTHLKE
CLAEQRLESCLSFSKKVQELVVLLVTWTVSLSTVAGTAIGIHYFSEYVHQVLHEEILKNN
HAGKELLLLALPLVVSLINLLMPYFYNLLAAWEKQESPVLEVYIAITRNLILKTIILGLL
SYHWLSWKVTSSEIQCWETFVGQELYRLMVMDLIFILLDVIFGELLWRIILEKKLQSKQR
PEFDIARNVLDLIYGQTLTWLGVFFAPLLPVVQILKLLLLFYVKKVSLMRNCQCPSKPWR
ASQMSTIFISLLCFPSFLGASVFLSYTIWAIKPSEMCGPFQTFDTIYDSWKAWVLKLEES
NPNITWFTWIHQNLFQTSYFLLLIIAMLMAAIYFTIEMVKGLRSIISILKGQIANEREDK
KFLIQRLHIIYEK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacacggtgtctttcacctttcaggactttgagaatggagaacctaccagccaa
gacctaagcccatatgatgaaggggccgtgcatgattccttccaccagctaattaaggag
cagagcagtttggctgagcaagagttggtggagatgcaagatctgactaccaggagcaaa
gaaaatctggttcatccctcagatccgactggaacttggaacccatatgcacggctggtt
gagcaccctgatttctcttccaccacattgcgcatccttgccaatatgcccagccggact
attgggcgcagcagaggagccatcctgtcccagtattgcaaccgcactgccaggcgacgg
cgacggagcaaccgtgcccctctccaggaagtatcccgttctgcacggcctagttttcga
gagctgtccctagagttggattccagttacagagaagaagaccccaagtatattttgctg
gtcaaagaactccagaacctgccagtacatcaacgcaatcacatgctgcagatgatgcct
ctaagcttggctgagaagcgcagactcaggcaggattcaagtgggcattcaggcaccttg
aggaaacccaagccaacgggtcgcttgtcttactgcagctggattaaataccacatccta
ataggcttccggaatttttggtacaatctgctgtccttcattcctattctccagccctgg
cattattccctcaagaagatcagtggccgctttggctctagcatcctctcctatttccta
ttcctcaggacgttgctcttcttcaatctctttatgttcctgatcctgctggtctttgta
gttgctgtgcaggctgctttcccttctgccatacccaacaatgtggctttcacaggatct
gagctcttaactggagcaggctacttcagtcacacagtgatgtattatggctactacagt
aatttcacactgaatgcccctgatgcttctgaggctaatagcacccattacaggcaacac
acacatagccagatgtcctacaatatgcctctggcttacctctttgttactggaagtgcc
ttctttggaatctgctttctcttgatctacagtttgtctcactcctttggggaaagttac
cgtgtaggcagtgcctcaagtaacctggcagtcaaagtcttctgttcctgggattacaaa
gtgattcagaaacgctcagtccaactccagagtgagaacattcgcacacatctgaaggag
tgtctggctgagcagaggctggaatcctgtttaagcttttctaagaaagttcaggaactc
gtagtcttgctggtgacctggactgtatccctgagcactgttgcaggcactgccattggt
atacactacttttctgaatacgtacatcaggttctgcatgaggagattttgaaaaacaac
catgctgggaaagagttgctgctcctggccctgcctctggttgtgtctctcattaacttg
cttatgccctatttttacaacctcctggctgcgtgggagaaacaggaatctccagtcctg
gaggtgtacattgccattaccaggaatttaattctcaagacgatcatcttgggcctactg
tcctaccattggttgagttggaaagtgacatcttcagagattcagtgctgggaaaccttt
gtggggcaggagctctaccgtttgatggtgatggatttgattttcattctcctggatgtc
atctttggagagctgttatggaggatcatattggaaaagaagttacaaagtaaacagagg
cctgaatttgacattgctagaaatgtgctagatttgatttatgggcaaaccttaacctgg
ctgggggttttctttgccccacttcttcctgtggtccaaattctcaaattgctgctgttg
ttctatgttaagaaggtcagcttgatgagaaattgtcaatgtcccagcaaaccctggcgt
gcatctcagatgagcaccatcttcatctctttgctgtgcttcccttcattcctgggtgcc
tctgtattcctctcctatactatctgggcaataaaaccatcagaaatgtgtggacctttt
caaacttttgatactatctatgattcttggaaggcatgggtactaaagctggaagaatcc
aatccaaatatcacttggtttacctggatccatcaaaacctcttccagacttcctatttc
ctgttgttaatcattgcaatgttgatggctgcgatctacttcaccattgagatggtaaag
ggtcttcggagtatcatttcaatactaaagggtcagattgccaatgaaagagaagacaag
aagtttctcattcaaaggcttcatattatatatgaaaaatga
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