Pituophis catenifer annectens (San Diego gophersnake): 139310978
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Entry
139310978 CDS
T11059
Symbol
PPFIA1
Name
(RefSeq) liprin-alpha-1 isoform X1
KO
K26226
liprin-alpha
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcae04131
]
139310978 (PPFIA1)
Membrane trafficking [BR:
pcae04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139310978 (PPFIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Crescentin
Motif
Other DBs
NCBI-GeneID:
139310978
NCBI-ProteinID:
XP_070791385
LinkDB
All DBs
Position
Unknown
AA seq
1228 aa
AA seq
DB search
MMCEVMPTISEAEIPSGGSGNRGSGSPLQSDADSHFEQLMVSMLEERDRLLDTLRETQET
LALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNICREQLLEREEEIAELKAERNN
TRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRE
RLRVALERCSLLEEELGTTHKELMILKEQNNQKRTQADGMPDINHDQENIPSTNGKRSSN
DSLNHDEDLAKVIELQDTIEKQTKEQSQMKERITALSNRVAELEEDLDTARKDLIKSEEM
NTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSLHRQS
EDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALTKAEERHGNIEERLRQME
TQLEEKNQELLRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLL
REIENTKKQVEELQNEKDQLVVNIEAIRAESDQLRIRAPTLHHRGPHLGSVPDFRYPLAP
SVIADNQTDSYSTSVLRRPQKGRLAALRDEPSRVQTLNEQDWERAQQASVLANVAQAFES
DADISDGEEDRETIFSSVDLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQR
AEEIESRVDGGSLDNPGRFRSMNSIPPPFPSGNLSGSSPPGSGISTPRRMPHSPAREVDR
LGIMTLSPVSREEIRDDKATIKCETSPPASPRSLHLDKSYKGALHTMSQEDIRDVRNSTG
SQDGQVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRSGQMNKELLGQVSALEA
ESSAQDGLGLGKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPA
WYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRT
TTGNVWVTHEEMENLTSTPQTTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARML
DHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERRREGSLNEIKDVLVWSND
RMIHWVVSIGLKEYANNLIESGVHGALLALDETFDHNALALSLQIPTQNTQARAVLEREF
NNLLVMGTDRKFEEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTTSMSSPS
MQPKKMQIDGNVSATQRLDSATIRTYSC
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgccgaccatcagtgaggcagagattccctcagggggaagtgga
aaccgtggttcaggttctccccttcagtcggatgctgattcccattttgagcaattaatg
gtatccatgttggaagagcgtgatcgcctcttggacacattgcgagaaactcaagagaca
cttgcattgacccagggtaaactacatgaagttggtcatgagagggattctctacaacga
cagcttaatactgcacttcctcaggagtttgcagcacttactaaagagcttaacatatgc
agagagcaactccttgaaagggaagaggaaattgcagaactgaaagcagaaagaaacaat
acaagattactactagaacatttggaatgccttgtctcccggcatgaaaggtctttaaga
atgaccgtagtaaaaagacaagctcaatctccagctggtgtttctagtgaagttgaagtt
ctcaaagcactaaagtctctatttgaacatcacaaagcccttgatgaaaaggtaagagaa
agattacgagtagcacttgaacgatgtagtttgttggaggaagaactaggtactacacac
aaagagttaatgattttgaaagaacaaaacaatcaaaaaagaacacaagctgatggaatg
cccgatattaatcatgatcaggagaacatacctagcactaatgggaagagatcttccaat
gactctttgaatcatgatgaagatcttgctaaagtaatagaacttcaagataccatagaa
aagcaaactaaagaacagtcgcaaatgaaagagagaatcactgccctttctaacagagta
gcagaactggaagaagatcttgatactgctagaaaagatctaatcaaatctgaagaaatg
aacacgaaattgcaaagagatgtacgagaggcaatggctcagaaagaagatatggaagaa
agaattacaactcttgaaaaacgctacctcgctgcacaacgtgaagctacatctgtgcat
gatcttaatgataaacttgaaaatgaaattgctaacaaagattcattgcatcgacagagt
gaagataagaataggcagttacaagaacgattggaactggctgaacaaaaattgcagcaa
actctgagaaaagctgaaactctgccagaagtagaggctgaattggctcagagagtagct
gcacttactaaggctgaagaaagacacggaaacattgaagaacgattgagacaaatggaa
acacagctagaagagaaaaatcaagaactactaagggctcggcaaagagagaagatgaat
gaagaacataataaacgtttatctgatacagttgataaacttttatctgaatctaatgag
agacttcagcttcaccttaaagaaagaatggcagctctggaagataaaaattcccttctc
cgtgaaattgaaaataccaagaaacaagtggaggagcttcaaaatgaaaaggatcagttg
gtagtaaacattgaagcaataagagctgaaagtgaccagttgaggatcagagcccctacc
cttcatcatagagggccacatttaggtagcgtaccagattttagatatccactggcacct
tcagttatagcagacaatcagacagattcctacagcacctcagttctaagacgtccacaa
aaaggacgcttagcagctctgcgagatgaaccttcaagggttcagactcttaatgagcaa
gattgggaacgtgcacaacaagcaagtgtgttggcaaatgttgcacaagcttttgagagt
gatgctgatatctcagatggcgaagaggacagagaaactatattcagctcagttgacctc
ttgtcacctagtggtcaggcagatgcccagaccttagccatgatgcttcaagagcaattg
gatgccatcaataaagaaattagactgatccaagaagaaaaggaaaacactgagcaaaga
gcagaggagatagaaagtcgtgttgatggtgggagtttagacaatcctggtcgatttcga
tcaatgaactctatcccgcctccctttcctagcggaaatctttctggctcctctccacct
ggtagtgggatttctactcctcgaagaatgccacacagtcctgctcgagaagtggacaga
ctaggaattatgacattatctccagtttctagagaagaaattagagatgacaaggctaca
ataaaatgtgagacctcaccgccagcctcacctcgatcactgcatttggataaatcttat
aaaggagctttgcatacaatgagccaagaggatataagagatgttcgaaattccacaggc
tctcaagatggacaagtaagcaatcccagtagcagtaatagcagtcaagattccctccac
aaagctcctaaaaagaaggggatcaaatcgtcaattggccgcctgtttggtaagaaagaa
aaaggtcgatctggacagatgaataaagagctcttgggacaagttagtgcattagaagca
gaaagttcagctcaggatggtttggggcttggaaaacttggaggacaagcagaaaagaat
agaaaactgcagaaaaagcatgaacttcttgaagaagctcggaggcagggtctgcctttt
gctcagtgggatggccccacggtggttgtctggctagagttgtgggttgggatgccagct
tggtatgtggctgcttgccgtgcaaatgtgaaaagtggtgctataatgtcagccttatct
gatactgaaatacagcgtgaaattggaatcagtaatcctttacataggttaaaactgaga
cttgccatacaagaaattatgtcactaacaagtccatcggctcctcctacatcaagaacg
actacaggaaatgtctgggtaacgcatgaagaaatggaaaatcttacatctacaccacaa
acgactttagcctatggtgatatgaaccacgaatggattggcaatgaatggcttcctagt
ttggggcttcctcagtatcgcagttattttatggaatgccttgttgatgctagaatgctg
gatcatttaactaaaaaagatcttcgtggtcaacttaaaatggtagacagttttcacaga
aatagcttccagtgtggcattatgtgtctccgaagattaaattatgatcggaaagaactt
gaaagaagaagagaaggaagcctgaatgaaattaaagatgtccttgtttggagcaatgac
aggatgattcactgggtggtatcaattggccttaaagaatatgcaaataaccttatagaa
agtggagttcatggtgcacttctggccttagatgaaacttttgatcacaatgcattagct
ctttctttacaaatacccactcagaatacacaggctcgtgctgttttggagagggaattt
aataatcttcttgtgatgggtacggacagaaagtttgaagaggatgatgataaaagcttt
agacgtgcaccttcatggagaaagaagttcagaccaaaggacataaggggtttagctgct
ggatcagcagagaccctccctgcaaattttagagttaccacttcaatgtcttcaccttct
atgcaaccaaagaagatgcagattgatggcaatgtatcagcaacacaaagattggattct
gctacaataagaacttattcatgttaa
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