Pituophis catenifer annectens (San Diego gophersnake): 139311150
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Entry
139311150 CDS
T11059
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139311150 (TOPORS)
03036 Chromosome and associated proteins [BR:
pcae03036
]
139311150 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pcae03037
]
139311150 (TOPORS)
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139311150 (TOPORS)
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139311150 (TOPORS)
UBL E3 ligases
139311150 (TOPORS)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
139311150 (TOPORS)
Cilium and associated proteins [BR:
pcae03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
139311150 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
PWI_Topors
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-ANAPC11
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
139311150
NCBI-ProteinID:
XP_070791607
LinkDB
All DBs
Position
Unknown
AA seq
937 aa
AA seq
DB search
MPRFFYFFIFKLVPSPFSPSNPESDSSPCLPLGLCIRFGKDGEATRSSSRSGGSSSLLIS
CLSVVPPSMCDPRERRSRAAGANGRRRWHQRSKPGLIPLADFFPKDNSVLSGINRLHQTM
PEEISPDSKCPICLDMFENVAYLDRCWHRFCFRCVLEWSKNKAECPLCKQPFHSIVHSMR
SADDYKVHSVRPSEMESFANPNGRRFRYRTTLTGEHPANVNSQRSSSSRRTMSSPNCGIL
FEGLSTQTTRQRDAEMHQMIRRLASRRQASLEGRFMRHIQEQEMISFRKALYRSGTRVRS
IEDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGIHGSLINIVQRVIMSNLNKFDL
ESQAFANELQPFLLQSTEHFLHEFINFARCPFNIEAYDEHANYDCPAPSREEGSASESSV
ITISPDETETQAPDCNVFRTDIGQAPWDDETPGPSYSNTEQVHISSSTALNTSESSDEEP
AGNRTGLQMSQENIEVNGDSCDSSDNCVIVDYVKPLAERTPELVQLSSDSEVSADDGKKE
ETDKVQPIQFCNFNLTDVSRSASPSSTGSRDGIANKINEYLSNEKRKSKSEKDEIKFRGA
SSLQSFSSKEACYGYNSSKRRKPESHVQHSDREHHSSKRKRKHRSREKRKKKKDGSRHKH
KKNKRKSTREKSTSQSLSPSSESTELRDLSWSRSQNRDYSGTSRIKDMDYYLRDDYSKSK
KYALYNPNAVRSYERHRSRNRSRSRFSSRSRSRSSSRSRSRSSSRSRTSRHHDRGRSEKP
GGKRKYKTRHLESSQRGSEETSSVRESNALKKSLPKDQTICSKATSVVDRQPRTETQHKK
KKKRSRSPSVEIIYEGVCTSKYDKKKPKRIKSTNLTNSSALSSVVITIDSDSDRENVITE
SKIFNQLPTKRSSLFLRLAQMINGNSHCQLHSPEQDV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggtttttttatttttttatttttaaattagtcccctcccccttttccccttct
aacccggaaagtgactcctccccctgcctgccacttggattgtgcatccggtttggaaag
gacggggaagcaactcgaagcagcagccgcagcggcggcagcagcagccttctcatcagc
tgtctttcggttgtgccgccgtccatgtgtgacccccgagagcgacggagccgagccgcc
ggcgccaatggccgtcgccgctggcaccaacggtccaaaccgggcttgatacccctggca
gattttttcccaaaggataattcagtcctatctggcatcaacaggctgcatcagacaatg
ccagaggaaatatctccagattctaagtgcccaatctgcctggacatgtttgaaaatgtg
gcctacttggatcgttgctggcacagattttgcttccggtgtgtgttggagtggtccaaa
aacaaagcagaatgcccactctgtaaacagccctttcattccatcgtgcacagcatgaga
tctgcagatgactacaaggtgcattctgtaaggccttcagaaatggaatcttttgctaat
cctaatgggaggcgattccgttaccgaactacgttaacaggagaacatcctgcaaatgtt
aattcccagaggtcttcctcttctcgaaggacaatgtcttccccaaattgtgggatcttg
tttgaagggttatcaactcagacaacaaggcagagagatgcagaaatgcatcagatgatc
agacggcttgcatcaaggcgacaagctagtttggaaggtagatttatgcggcacattcaa
gagcaagagatgattagctttcgaaaagctctgtatcgttctggcacacgtgtgagaagc
attgaagatggagggcgttatagggacatatcggctgaatttttccgcaggaatcctgcc
tgccttcataggctggtaccatggctaaaacgtgaacttacggtcctgtttggaattcat
ggatcgctcattaatatagttcagcgtgtaataatgagcaatttgaataagtttgacctg
gaaagccaggcatttgccaatgaactacagcctttcttactgcaaagcacagagcatttc
ttacacgaatttataaattttgccagatgtccatttaatatcgaagcgtatgatgaacac
gcgaactacgattgtccggctccatcaagagaagaaggaagtgcatcggaatcttcagtt
attacaatatcacccgatgagacagaaacacaggcacccgattgcaatgttttcagaact
gatataggccaggcaccctgggatgacgaaacacccggtccctcctattctaacacagaa
caagtgcatatttcttcatcaactgcgttaaacacttcagaaagctctgatgaagagcct
gctggaaatagaacaggattgcagatgtcacaagaaaatatagaggtgaacggtgacagt
tgtgattcatcggacaactgtgtaattgtggactacgtcaaaccattagctgagagaacc
cccgagcttgttcagctgtcctcagactctgaagtttcagctgatgatgggaaaaaggaa
gagacagataaagtgcagcctatccaattctgcaactttaacctgacagatgttagtaga
tctgcttcgccctcgtctactggatccagagatggtattgctaataagattaatgaatat
ctctccaatgaaaaaagaaaatcgaagagcgaaaaagatgagattaaattcagaggagcc
tcttcgttgcaaagcttttcttcaaaggaagcctgttatggatacaattcatcaaaaaga
aggaaacctgaatcgcatgtgcagcattctgacagagagcatcacagttcgaaaaggaag
aggaagcatcgcagtagggaaaaacgaaaaaagaaaaaagacggcagtagacataagcac
aaaaagaataaaaggaaatcaacccgagaaaagagtacgtcccaatctctttctccaagt
agtgaaagcactgaactgagagatttaagttggtcacgatctcaaaacagagactatagt
ggaacttccaggattaaagacatggattattatttgagagacgattattcaaaaagcaaa
aaatatgctttatacaatccaaatgcagtcagaagttatgaaagacatagatcgagaaac
cgatcaagaagtcgatttagcagccgatcaagaagtcgatctagcagcagatcaagaagc
cgatctagcagcagatcaagaacttccaggcatcatgatagaggacgttctgaaaagccg
ggtgggaaaaggaaatataaaacacgtcacttggagagcagccagagaggtagcgaggaa
acctcttctgtaagagaaagcaatgctctaaagaaatccttaccgaaggatcaaaccatt
tgttcaaaagccaccagtgttgtagacagacaacctagaacagagactcagcacaaaaag
aagaagaagcggtcaagaagccctagtgtggaaatcatttatgaaggtgtgtgtacatca
aaatatgacaaaaagaaaccaaaaagaattaagtctaccaatcttaccaattcatctgca
ttatcttctgttgtgattactattgacagtgatagtgatagagagaatgttattacagaa
tctaaaattttcaaccagttgccaactaagagatcatctttgtttttacgtctggcacaa
atgataaatggcaattcacattgccagctacattcaccagagcaagatgtgtaa
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