Pituophis catenifer annectens (San Diego gophersnake): 139311447
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Entry
139311447 CDS
T11059
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcae03036
]
139311447 (DDX4)
Enzymes [BR:
pcae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139311447 (DDX4)
Chromosome and associated proteins [BR:
pcae03036
]
Eukaryotic type
Gene silencing
piRNA pathway
139311447 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
139311447
NCBI-ProteinID:
XP_070791981
LinkDB
All DBs
Position
Unknown
AA seq
677 aa
AA seq
DB search
MGDENWDTEFTEGVSGEGSRALPVFQPSFQKPGSISMRTNETLCNFTQGIKQPGVRENRN
GEEKQTGGFGSGRIFGNRGNRFEDRKSSSFVRGFQRTNDDISVLHRAGRGSFRGDRDRGG
FGKFTTDDVNVKQDRRQNSVSLGFKRRSFGTPSGEFETRRDFEARGEFESRRQFEARGDY
KENNEEANIASGRNPKVTYVPPPPPDDENSIFAHYQTGINFDKYDNILVEVSGLDPPPAI
LNFEEAGLCETLIKNIAKVGYFKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLIPIL
AHMMRDGVTASQFKMEQEPECIIVAPTRELINQIFLESRKFSYGTCVRPVVIYGGIQMSH
TIHQIKLGCNILCATPGRLLDIIGRQKIGLSKLKYLVLDEADRMLDMGFGPDIKKLISSP
GMPSKDKRQTLMFSATFPDEIQRLAGEFLKTDYLFVVVGQVGGACSDVQQTILEVKQYDK
KDKLVEILNEIGNERTMVFVETKKKADFFATLLCQENISTTSIHGDREQREREEALHYFR
TGRCPVLVATSVAARGLDIENVQHVINVDLPSTIDEYVHRIGRTGRCGNIGKAISFFDAQ
ADSAIAQPLIKVLADAQQEVPAWLEEIACGSGGIGFSNPKGNVFAAVDSRKVFCSKDSHH
SGGFAASNVLVADESWD
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgagaactgggacacggagtttacagaaggtgttagtggagagggaagccgg
gccttgccagttttccagcccagcttccagaagccgggcagcatatccatgagaacaaat
gaaaccttgtgcaatttcactcagggtataaaacagccaggtgtcagagaaaaccgtaat
ggtgaagagaaacaaacaggtggatttggaagtggaagaatttttggaaacagaggaaat
aggtttgaagacagaaaatcttcaagttttgtaagaggttttcaaagaacgaatgatgac
attagtgttcttcatagagctgggagaggatcattcagaggtgatagggacagaggagga
tttgggaaatttacaacagatgatgtaaatgtgaaacaagatagaagacaaaattctgtc
agcttaggttttaaaagaagaagctttggtactccatcaggtgaatttgaaactagaaga
gattttgaagccagaggtgaatttgaaagtagaagacaatttgaagccagaggggattac
aaagaaaacaatgaagaagcaaatatagcttctggaagaaatccaaaggtgacatacgta
ccaccaccaccaccagatgatgaaaatagcatctttgcacattaccagacaggaataaat
tttgataaatatgataatattcttgtggaagtttcagggcttgatcctccaccagcaata
ttgaattttgaagaagctggtctatgtgaaacgttaataaagaacatagctaaagttgga
tattttaaacttactcctgtgcagaaatatagtattcctattgtgctggcaggacgtgac
ttaatggcatgtgcacaaacaggatctggaaaaacagcagcttttcttataccaatttta
gctcacatgatgcgagatggagtgactgccagtcaattcaaaatggaacaagaaccagaa
tgtataattgtagcaccaactagagaactgataaatcagatctttctggaatcaagaaaa
ttttcatacggaacttgtgtaagacctgttgtgatttatggaggtatacaaatgagccat
acaattcatcagataaagctaggctgtaatatattgtgtgctaccccaggaagacttttg
gatatcataggcagacaaaagattgggctcagcaaattaaagtatttggtgttagatgaa
gctgatcgtatgctggatatgggatttggccctgatataaagaaattaatttcatctcca
ggcatgccctcaaaagacaaacgccaaacattaatgtttagtgccactttccctgatgaa
atccaaagactcgctggagaatttttgaagacagactacttatttgttgttgttggacaa
gtgggaggagcatgcagtgatgttcagcagaccatacttgaagtgaagcagtatgacaag
aaagacaaacttgtggaaattcttaatgaaataggcaatgaacgaactatggtattcgtg
gaaacaaagaaaaaagcagatttttttgcaactttactttgccaagaaaacatatcaacc
acaagtattcatggtgaccgggaacagagggagagagaagaagcacttcattattttcgt
actggaagatgccctgttcttgttgctacatctgtagcagcaagaggtctggatatagaa
aatgttcaacatgttattaatgttgatctcccttccacaattgatgaatatgttcatagg
attggacgaactgggcgttgtggtaatataggcaaagcaatttctttctttgatgctcag
gcagacagtgctattgcacagcccctaataaaagtgcttgcagatgctcagcaagaggtt
ccagcatggttagaagaaattgcttgtggttcaggtgggattggttttagtaatccaaag
ggaaatgtgtttgcagctgttgattcccgaaaggttttctgtagcaaagacagtcatcac
agtggaggatttgcagcatcgaatgtacttgtagcagatgagtcctgggattaa
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