Pituophis catenifer annectens (San Diego gophersnake): 139311456
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Entry
139311456 CDS
T11059
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pcae00535
]
139311456
04091 Lectins [BR:
pcae04091
]
139311456
Proteoglycans [BR:
pcae00535
]
Cell surface proteoglycans
Others
139311456
Lectins [BR:
pcae04091
]
C-Type lectins
Others
139311456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
DUF2288
Motif
Other DBs
NCBI-GeneID:
139311456
NCBI-ProteinID:
XP_070791991
LinkDB
All DBs
Position
Unknown
AA seq
2380 aa
AA seq
DB search
MAPGWSSRAFLLLLLMLARSRETLAASFYGESYIQLKVAETLSEISLKLRFQTSRPDGLL
FLAPGKEDYFLVELNSGNIQVKINFRTNEQILRSQLHSQLDDLEWHLLEIHHERENITLV
IDKNYQTSAIVPHSLVFELNIEYGLYIGGRGALDVHYLNSTPINFRGCINDVILNNHDIL
TSLKSSVRNKNIHEVSLSCSNEFFAGEEEPVSFFSSKSYVSFPLWNVQAGGVLEYSVQTT
AQRGLLLYSSGPVGDFVAMEIENGLIRAHIRMGKNRLELSSLSPVNDNQWHVIRLKFSIK
YVELTLEKKTVKTPLPSHSRLPVLKGALYVGGINDALRAEVLKYGLASVSGRYGEGGSFR
GCLKDLIIGSQKYSLKNVLVTKDISVGCTIPNFTPEKQVVRIASSISVAGTVAPKLLRKE
SYDHFLFVNNLIVPEGGQAFLGSKHIKVSVDFKALGIRQSQILFRIKHPPSYGQLRLNVV
SKQENFTFSMLDLWQGKVLYIHDGSEESYDYFTFSVSTSSKRKMPLYLQGNDDYMFTITV
RPINDAPELIFPNGNLLLLLEHSKKCLSIDSVNIVDNDTSVADLSITVLGNSNTDAGFLE
NSKTPGQTITTFSYEDLQHGNVFFVHTGVQNSRIVLRASDGEKVSNTVVLRVMAVPLDYK
LVNNTGVDVVQGTTVLITLKHLATEINAFQQELEIRYEITEEPFFGEIQRRLTGREWKKI
NYFSQRSIERGRVRYLSTFKAIQQDNVHEHFKFRIIIGSNISQEFLFAIRVKWLTYNLLK
YAPLVIDKSDREYLNSNNLLAVIPQIDLSENEFFYKLQSLPEKGRILLDNVPLQINSSFS
QQNISDCKVEYQLYRKSHEESLDSFRFFISTQYVISDIYDFKIKIKTNPQTIILINSGLT
VTEGEGSLITKSELFAQTFSNTTFEYKVTKSPQHGKLMLINFSDSPESNNNLSSFTNQDI
YGERLMYIHDDSETQCDEIHITATAIKFGEEDLDTEFPLLVEIKFNISIHLKNDEKPIRV
VDKVFHVVKNGRKLLTLDDLCYHDPDTDFDDNQLLYTRRGIPNGDLVLVNETSYRLYQFK
QEDLIQKQVLFVHRGATYGRFVLFVTDGKHYTSSLLEVSASEPYVLLANNTGLLIQKGKE
AVITTTNLSATTNQDIRSDHEIRFEIFFSPKYGQIFVNNLALATFTQHDLRMEHVTYRHD
DSNNLIDTLNFTVYAKGLHLYAKMNIQIYLESHQRPPVILHNHSLLVEEGKPVQISNGKL
LAVHENSLPSEIEFKIRSSPVYGYLWKFISKENYLGAEKNPVLSFTQQDINDGIIQYIQT
ISNQLQDHFSLDVTNGIQTVSGIEITVDIMPKLIPLEVHNFTVAEGNSKVLEEDILKISN
SHFAEVNCDFGLAESPKHGRIANSHFFGMALTKFTRKQVEQGLIFYVHDDSEQLLDNFTI
IANCTQLWKHSLPQIIFVTITPVNDEAPIIKRNIALRVWVGSVTEITTNELLAEDKDSSP
VELLYSVSPPNNGHLALKSSPNKNILNFTQAHIEEGQVVFVHRGSMSGGFSFQVTDGINF
APRQIFSITARNLVIRLENNNGLEIFPGSRKPITSYHLKAVTNDVVEVENRTIVFTIANS
PKLGRLICIFSENNIRDISSFTQSMVDKGLIIYEHSDKQSVDWSTQDYFTFTVSSPPAAL
GPQVFHINISYEIRAHNQSSQLLANTGVVVQEGGKVLIDKTKLDSSNLLSKLPQTQRSSF
EVWYEVIALPQHGRIIVGERNITRDKPHFSQYIINKFGITYVHDDSESLTDHFIFAVWLN
EKSKSTVKPNIDVIEEAFNITVVPVNDQVPKLKSKLLCLNVLQGDRTVLGQDNLNVEDLD
NSPEEIKYTVITDPQNGHLALWTRLNESIKNFTQADINDGSVWFVQDGSPFSGVFYFSVT
DGQHRPQYKLFQLDVIPVSITLINFTEVVLLQGQDRVAITNVHLSAITNGKNPEIRFEVT
KPFRYGSLLIENEQVTSFHQRDLYAEKLLYCMADFTAFGDALEFTVFTRDSNLTGQVLKL
LVQPLLQMALNVTIPNRMSYQLNASYLDATQLANLTKSNPQFEVIMSPVYGSLSRKSLSN
AESKNLVFFTKRDIDMGVIFLETSANMTNTDVLNDSFSFILKADNVQPAVGEFHFVIVQQ
DPSPVQVFTPEVPFLTTVDILETYITENEHLVVPKHGTHTDVPAQTFRSDQIHWEHQKDR
QYDEDNTVWSVTTINTQTESTWLQTLSSRNWLIIIIPLSSVTALFIIIAIVLCIFLICHR
SKKTKPFILEQPPVILNSSSFSTERSLTIPTVTVTPLLKSTDKTSVLPFVSLQREQSHPM
PATPDPAVSLLQSTWSSLDPEIIQHCRKTHPTLKCNQYWV
NT seq
7143 nt
NT seq
+upstream
nt +downstream
nt
atggcccccggctggtcttcaagagctttcttgctgctccttctgatgctcgctaggagc
cgagagacgctcgcagcatcattttatggtgaaagctacatacaattaaaggttgctgaa
acactgtctgaaatatcactgaaattacgttttcagacaagtagacctgatggattgctt
tttcttgctcctggaaaggaagattattttttggtggaattaaattctggaaatatacag
gtgaagatcaactttcgaacaaatgaacagatccttcgttcccagttgcactcacaactt
gatgatttagagtggcatcttcttgaaattcatcatgaaagagaaaatattactctagtg
attgataaaaattatcaaactagtgcaatagtgccacattccttagtatttgaactaaac
attgaatatggtctctatattggtgggagaggtgcccttgatgtccactatcttaacagt
acaccaattaatttccgaggatgtattaatgatgtgatacttaacaaccatgatatctta
acctccctgaaatcttctgtaagaaataaaaacattcacgaagtatcactgagctgtagc
aatgaattttttgcaggggaagaagagcccgtaagtttttttagttccaaatcctatgtt
tcatttcctctttggaatgtccaagcaggaggcgttttggaatattcagtgcaaactaca
gctcagaggggattgctgctctacagttctggtcccgtaggagactttgttgcaatggaa
attgaaaatggtctcattagagctcacattagaatgggtaaaaatagacttgaactttct
tctcttagccctgtcaacgataaccagtggcatgttatcagattaaaattttccataaaa
tatgtcgaactcactctagaaaagaaaactgtgaaaactccattgccttctcatagtagg
cttcctgtccttaaaggggccttatatgtgggtggaataaatgatgcactccgtgcagaa
gtgctaaaatacgggttagcttcggtttctggaagatacggagaaggcggatctttcaga
ggctgcttgaaggatttgataattggttcccaaaaatattccttgaaaaatgttctagtg
actaaggatatttcagtcggatgtacaatacctaattttacaccagaaaagcaggttgtg
agaatagcctcttccatttctgttgctggtactgttgctcctaaattgcttaggaaagaa
agctatgaccattttttgtttgtcaacaacttgattgtgccagaaggtgggcaagcattt
cttggttctaagcacattaaagtcagtgtggacttcaaagcactggggattcgtcagtca
caaattctttttagaattaaacatcccccttcttatggccagttgaggttgaatgttgtg
tcaaagcaagaaaacttcacatttagtatgctagatttgtggcaaggcaaagttttatac
attcatgatggttctgaagaaagctatgattatttcactttctctgtttctacaagcagt
aaaaggaagatgcctctgtatctccaaggaaatgatgactatatgtttactattacagtg
agaccaatcaatgatgctccagaactcatatttccaaatggaaacttacttcttctctta
gaacactccaagaaatgcctgagcatagattcagtaaatattgtggacaacgacacaagt
gttgcagatcttagtattacagtccttggaaattcaaacacagatgcaggttttctagaa
aattccaagactcctgggcaaacaattactaccttttcctatgaggatttacaacatggt
aatgttttctttgtccatactggagttcagaattccaggattgttctgcgagcaagcgat
ggggagaaagttagcaacacagtcgtgttgcgtgtcatggctgtacccctggattataaa
ttagtcaacaacacgggagttgatgtggtgcaaggcaccacagtgttgataacactcaaa
catttggccacagaaataaatgcttttcaacaagagctggagataagatatgaaatcaca
gaagaacccttttttggagaaattcagaggaggcttactggtcgagaatggaaaaaaatt
aattatttttctcaacgatccattgaacgtggtcgtgtgaggtatctttctaccttcaaa
gcaattcagcaagataatgtccacgaacattttaaatttagaattatcatcggtagcaat
ataagccaagagtttctgtttgctattagagtaaaatggttgacttataatttactgaaa
tatgcaccattagttattgataaatcggatagagagtatcttaattctaataaccttctt
gcggtcataccacagatagacctgtcagaaaatgaatttttttacaagctgcaatccttg
cctgagaaaggaagaattctgcttgataatgtcccactgcaaataaattccagcttcagc
caacagaatatttctgattgtaaagtagaatatcaattatacaggaagtcccacgaagaa
agtctggattcatttcgattcttcattagtacccagtatgtgatatcagatatctatgat
ttcaaaatcaagatcaaaacaaacccacaaaccattattttgataaacagtggtcttact
gttactgaaggtgaaggatcactgataacaaaatcagaattgtttgcacagaccttcagt
aatacgacttttgagtataaggttacaaaaagtcctcaacatgggaaattaatgcttatt
aatttttctgattccccagaaagtaacaacaatcttagtagtttcactaatcaggatata
tatggagaacgtcttatgtatattcatgatgactcagagacgcagtgcgatgaaattcat
atcactgcaactgccataaaatttggagaagaagatttagatacagagtttccattatta
gtagagatcaaatttaatatttctatccacctgaaaaatgatgaaaaaccaattagagta
gtggataaggtatttcacgttgttaagaacggaaggaaactcttgactttggatgatctt
tgctatcatgaccctgatacggattttgatgataatcagttgttatacaccaggcgtggc
attcctaatggagacttggttcttgtcaatgaaacatcatatagactctatcagttcaag
caagaggaccttatacaaaagcaagtcctctttgttcatcgaggtgcaacttatggtcgt
tttgtgctatttgtaactgatggaaaacattatacatcatctttgctagaagtaagtgct
tctgaaccatatgtccttctagcaaacaatacaggattattgatccaaaaaggaaaagaa
gcagttattaccacaactaacctgagtgctaccacaaatcaagatattagaagtgatcat
gaaattagatttgagatatttttttccccaaagtatggacaaatctttgttaataattta
gcactggccacttttactcagcatgatctcagaatggaacatgtgacttatagacatgat
gatagcaataatttgattgacacattgaacttcactgtttatgctaaaggactccacttg
tatgctaaaatgaacattcagatatatttggaaagccatcagcgtccaccagtgatccta
cataaccacagccttttggttgaagaagggaaacctgttcaaatcagtaatggaaaattg
ctggctgtgcatgaaaacagcttgccatcagagatagaattcaaaataagatcatctcca
gtctatggctatctttggaagtttatatcaaaagaaaactaccttggagcagaaaaaaat
ccagttttgtcttttactcaacaagacatcaatgatggtattatccagtacatacagacc
atctccaaccaactccaagaccacttttccttggatgtcaccaatggcatccagacagtc
agtggaatagaaattactgtggacatcatgccaaagctgatcccactagaagtacacaac
ttcacagttgctgaagggaattcaaaagtccttgaagaagatattctaaaaatttctaat
agccactttgcagaagttaattgtgacttcggtctagctgagtcaccaaaacatggacga
attgcaaactctcatttttttggaatggcattgactaaatttaccagaaaacaggtagaa
caaggtttgatcttctatgttcatgatgacagtgaacagctgcttgacaattttaccatt
attgcaaactgcacacaactatggaagcatagcttgcctcagatcatatttgtgactatt
acaccagtaaatgatgaagctcccatcataaagagaaatatagcactccgggtgtgggta
ggatcagtcactgaaataacaacaaatgaactcttggcagaagataaagattcttctcca
gtagaattattgtattctgtttctcctccgaataatggccacttggcactcaagtcttct
ccaaacaagaatatccttaattttacccaagctcatattgaagaaggacaagtggtattc
gtccatagaggatcaatgtctggaggtttcagttttcaagttacagatggcataaacttt
gcacctcgtcagatatttagcatcacagctcgaaatttggttattcgccttgaaaataat
aatggattagaaatttttccaggttccaggaaaccaattacatcctaccatctgaaggct
gtcaccaatgatgtggttgaggtagaaaacagaacaattgtttttacaattgcaaattcc
cccaaacttggaagactgatctgtatattttctgaaaataacatacgggatatttcaagt
tttacacaatctatggtggataaaggattgatcatctacgagcattcagacaaacaatca
gttgattggagcacacaagattattttacatttaccgtctcttctccaccagctgctctg
ggaccgcaggtgttccatattaacatatcctatgaaattagagcacataatcagagcagt
cagctactggccaacacaggtgttgtcgtccaggaaggtggcaaagttttaattgataaa
actaagctggatagctcaaacctactctctaaattaccccagacacagcgttcttcattt
gaagtgtggtatgaagtcatagcattgcctcaacatggcagaattattgtgggagaacga
aatattactagagacaaaccccatttctcccagtatatcattaacaaatttggaattacc
tatgttcacgatgactctgaatcactcaccgatcactttatctttgctgtgtggctaaat
gagaaaagcaagtctaccgtgaaacccaatattgatgttatagaagaggcatttaatatt
actgttgtaccagtgaatgaccaggttccaaaactaaagtcaaaactgctgtgtttgaat
gttttgcaaggagatcgaacagttctaggacaagataacctaaacgttgaagatttggat
aactcaccagaagagattaaatataccgttataactgatccccaaaatgggcatttagca
ctgtggactcgtttgaatgagtctatcaaaaatttcacacaagctgatattaatgatggc
agcgtttggtttgtacaagatgggagccctttctcaggggttttctattttagtgtgacc
gatgggcagcaccgtccacagtataaactctttcagcttgatgtgataccggtgtccatc
acattgattaacttcacagaagtggttcttctacagggacaggacagagttgctattaca
aatgttcatctttcggccataacaaatgggaagaaccctgaaatcaggtttgaagtcaca
aagccttttagatatgggagtcttctgattgagaatgaacaggtgacctcatttcaccaa
agagatttatatgcagaaaaattgttgtactgtatggcagacttcactgcttttggcgat
gcgttagaatttacagtgttcacaagagacagtaatctaacaggacaagttctgaagctc
ttagtacaacctcttttgcaaatggctcttaatgtgaccattcccaacaggatgtcttac
cagctcaatgcaagttatttggatgctacacagttagccaacctgacaaaaagcaacccc
cagtttgaagtcataatgtcaccagtttatggaagtctttcaaggaagtcgttgagtaac
gctgaaagcaagaacctggttttcttcacaaaaagggacattgacatgggtgtcattttc
cttgaaaccagtgctaatatgacaaatactgatgtattaaatgattccttttcctttata
cttaaagcagacaatgttcagcctgccgttggtgagttccactttgtcatagtgcaacag
gatccttcaccggttcaggtgtttactccagaagtgccttttttaactactgttgacatt
ttagaaacttacattacagaaaatgaacatctggttgttccaaagcatggtacgcacaca
gatgtaccagcacagactttcaggtctgaccaaatccattgggagcatcagaaagataga
cagtatgatgaagataatactgtttggtctgtgaccacaataaatacacagactgaaagc
acctggcttcagacattgagcagcaggaactggttgataatcatcatacccctttcttct
gtgactgctttattcattataattgccattgttctttgtatcttcctaatatgccataga
tcaaagaagacaaaaccttttattttagaacagccaccagtaattctcaacagttcaagc
ttttccacagagaggagcttaacaatacctactgtcacagtgacacctctcttaaaaagc
acagacaaaacatccgttttaccattcgtgtccctccagcgggaacagtctcatccaatg
ccagctactccagatccagcagtaagtcttctgcaaagcacctggtccagccttgaccca
gaaattattcagcactgtcgaaaaactcacccaacattgaaatgcaatcaatactgggta
taa
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integrated database retrieval system
