Pituophis catenifer annectens (San Diego gophersnake): 139311537
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Entry
139311537 CDS
T11059
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139311537 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139311537 (MYO5B)
04131 Membrane trafficking [BR:
pcae04131
]
139311537 (MYO5B)
03029 Mitochondrial biogenesis [BR:
pcae03029
]
139311537 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcae04812
]
139311537 (MYO5B)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139311537 (MYO5B)
mRNA cycle factors
P-body specific factors
139311537 (MYO5B)
Membrane trafficking [BR:
pcae04131
]
Others
Actin-binding proteins
Myosins
139311537 (MYO5B)
Mitochondrial biogenesis [BR:
pcae03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139311537 (MYO5B)
Cytoskeleton proteins [BR:
pcae04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139311537 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
AAA_22
WIV_dom_3
AAA_16
Ac76
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
139311537
NCBI-ProteinID:
XP_070792095
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFFASVGGSSSESN
IEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYRIIGANMRTYLLEKSRVVF
QAADERNYHIFYQLCASASLPELKDLSLLEAKDFFYTSLGGDTSLEGVDDAEDFEKTKQA
FTLLGVKESYQMTIFKILAAVLHLGNVDFRSERDGESCSITNQDQHLHHFCRLLGVEHSQ
MEHWLCHRKLVTTSETYTKNMSLQQAVNARNALAKHIYAQLFNWIVQHINKALYTTVKQH
SFIGVLDIYGFETFEYNSFEQFCINYANEKLQQQFNLHVFKLEQDEYMKEQIPWTLIDFY
DNQPCIDLIEAKLGILDLLDEECKVPKGTDENWAQKLYDRHGNSQHFQKPRMSNMAFIIV
HFADKVEYYCEGFLEKNRDTVHEEQINILKASKYPAIVELFHDEKDPAPAAPSGKKTSKI
NIRAARPTVKAANKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDEKLPFTFDPK
RAVQQLRACGVLETIRISAAGYPSRWTYHDFLNRYRVLMKDKSISKKKDKILICKTLLES
LIKDPDQFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRRKYRKTREAA
LSIQRFTRGYLARRLADHLRKTRAAIIFQKQYRMLRIRRAYQAIRQAAITIQSFTRGMFV
RKNYQKILMEYKAIILQKHTRAWLARKNFTKFRCAAVIIQCYFRRMKAKQELKALKIEAR
SAEHLKRLNIGMENKVVQLQRKIDEQNKEYKSLNEQLSTAASAHCTEIEKLKKELERHQR
KKGDTNQLVSLQEEIDSLRLALEKAHGERKIVEDTYAKEKQVLQKRISDLEEENGLLKEE
KEALNNKILGQSEDEFAKNAVEENLMKKELDEERARYQNLVQEYSRLEQRFENLSDEMTL
IKQSPGHRRNPSNQSSLESDSNYPSISTSEIGDTEDAIQQIEEIGLEKAAMDMNLFLKLQ
KRVRELEQERRKLKTQLEKKENESKKSQTSEPPENEMDLDRDTDLAYNSLKRQELESENK
KLKNDLNELRKTVVDGVVQNNSSNDVHDTYNLLLNQLKSASEELEVRKEEVLILRTQIIR
AAQQKDAGRNMESNLKTQTSWPNSDKHVDPEDAIEAYHGMCQTNRKTEDWGYLNEDGELG
LAYQGLKQVARLLEAQLQEQRREYEEEIEVLKDQMETLKEAMEKQHEVFLQTLQLSPEAQ
VEFGIQQEISRLTSENLDLKEMLEKLEKNEKKLKKQLRIYMKKVQDYEADQAVTQSEKRK
HEISRHVTVQRKEKDFQGMLEYCEEDESSLIKNLITDLKPQTVSATVPCLPAYILFMCIR
HADYINDDQKVHSLLTSTINGIKKVLKKHNEDFEMTSLWLSNTCRLLHCLKQYSGDTGFM
TQNTPKQNEHCLKNFDLTEYRQVLSDLSIQIYQQLIKIAEGVLQPMIVTAVLENESIQGL
SGVKPMGYRKRSSSRGDSENTYSLEAFIRQLNTFLSIMYDQGLDPEIIQQAIKQLFYMIN
AVALNNLLLRKDMCSWSTGMQMRFNISQLEEWLRGKNLHPSGAAKTLEPLIQAAQLLQLK
KKTPEDAEAICSLCTSLTTQQIVKILNLYTPVNEFEERVTVTFIRNIQAQLQERNDPPQL
LLDFKFMFPVLFPFNPSSLTMDSIHIPASLNLEFLNRV
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatggatcctcatattttcgcagttgcggaagaagcatataaacaaatggcc
agggatgagaagaaccagtccattatcgttagcggggaatccggggcgggcaaaacagtc
tcggccaaatatgccatgcggttctttgcctcagttggaggctcctccagcgaatccaat
attgaagagaaggtcctggcttccagtcctatcatggaggcaatcggtaacgcgaaaacc
acccggaatgacaacagcagccgttttgggaaatatattcagattggcttcgataaaaga
taccgtatcattggtgccaacatgaggacgtacctgcttgagaaatcaagagtggtattc
caggcagctgatgagcgaaactatcacattttctatcagctgtgtgcctctgctagtctc
ccagaactgaaggatctctcattattggaggccaaagattttttctacacgtcgttggga
ggagacacctcccttgaaggagtcgacgatgcagaagattttgagaaaacaaagcaagcc
ttcaccctgctcggagtaaaggagtcctatcagatgaccatttttaagatactcgctgcc
gtcctacaccttggaaatgtggattttcgttccgaacgtgatggagaatcctgcagtata
acgaaccaagatcaacacctgcatcatttttgcagattactgggagtggagcacagtcag
atggaacactggctttgccatcggaagctggtcaccacttcggaaacctacaccaagaat
atgtccctccaacaagccgtcaacgccaggaatgcgctagccaagcacatctacgctcag
ctgttcaactggattgtgcagcatatcaacaaggccttgtacacgacggtcaagcagcat
tcctttatcggtgtactggacatttatgggtttgagacctttgaatataatagctttgaa
caattctgcatcaattacgccaatgaaaaattacaacagcagttcaatttgcatgtcttt
aaattggaacaagatgaatacatgaaggagcaaattccctggaccctcatcgatttttat
gacaatcagccatgcatagaccttatagaagctaagctgggtatcttggatttgctggat
gaagaatgtaaggtccctaaagggacagacgagaactgggctcagaaactctatgatcgc
catgggaacagtcaacatttccagaagcctcgcatgtcaaacatggcattcatcattgtg
cactttgcagataaggtggaatattattgtgagggctttttggaaaaaaaccgagataca
gtccacgaagaacagatcaatattctgaaggccagcaagtacccagcgattgtggagttg
ttccatgatgaaaaagaccctgctccagctgctccttctggaaagaaaacttccaagatc
aatatccgcgctgcccgtccaactgtaaaagcagccaataaagaacacaagaaaacagtg
gggcaccagtttcgcaattcattgcacctattaatggagaccctgaatgctaccactccc
cattatgttcggtgtatcaagcccaatgatgagaagctgcctttcaccttcgacccaaag
agagcagtacaacaactaagagcttgcggagtgttggagaccatccgtatcagtgcagcg
ggctacccatccaggtggacctaccatgacttcttgaatcggtatcgggtgcttatgaaa
gacaaaagtatttcgaaaaagaaagacaagatactgatttgtaaaacgttattggaaagc
ctaattaaggatcctgaccagtttcagtttggacgtacaaagatctttttccgtgctggc
caggtggcctacttggaaaaattgcgggcggataaattccgggctgccaccatcatgata
cagaagacggtgcgtggctggttgcagaggagaaagtacaggaaaaccagggaggcagct
ttaagtatccagaggttcacccgaggatatctggcacgcagattggcggatcatctaagg
aaaacaagagctgccattattttccagaaacaatatcgaatgttaaggatacgccgggcc
taccaagccatccgtcaagcagctatcaccatccagtccttcacccgaggaatgttcgtt
aggaagaactatcaaaagatacttatggagtacaaggccatcatcctccagaaacacact
cgagcttggctggctcggaagaatttcaccaagttcagatgtgcggctgtgattatccag
tgctatttcaggcgcatgaaagccaagcaagaactgaaagctctgaagatcgaggcccgg
tcagccgagcacttgaagaggctcaacattggcatggaaaacaaagttgtgcaactacag
agaaagatagatgaacagaacaaagaatataagtctctcaatgagcagctctccacagca
gcctctgctcattgcacagagattgaaaagctgaagaaggaactggaacgccatcagcgg
aagaagggagacacgaatcagctcgtgagcttgcaggaagaaattgattctctccggctg
gccctggagaaggctcacggggagcggaagatcgtcgaagatacgtatgccaaggagaag
caggtgctccaaaagaggatatctgatttggaagaagagaatggcctcctgaaggaagaa
aaagaggcactgaacaacaaaatattgggtcagtcagaagatgaatttgccaaaaatgca
gttgaagaaaacctgatgaagaaggagcttgatgaggagagagcacgttaccagaacctt
gtgcaggaatattcaaggctggagcagagattcgagaatctgagtgatgagatgactctc
atcaagcaaagtccgggacacagaagaaatccatcaaaccaaagcagcttggaatcggat
tccaactacccatccatttctacatccgagataggagacacggaagatgcaatacagcag
atagaggaaattggcttggagaaggcagccatggacatgaatctcttcctaaaacttcag
aagagagtgcgggaacttgaacaggagagaagaaaattgaagactcagctggaaaagaaa
gagaatgaaagcaagaaatctcagacttcagagcctccagagaatgaaatggatttggac
cgagatacagatctagcatacaacagtctgaagaggcaagagttagaatccgagaacaag
aaactgaaaaatgacctaaacgaactcaggaagactgttgtggatggcgttgtccaaaac
aattcttccaatgacgttcatgacacctacaacctactcctgaatcagctcaagtcagct
agtgaagagctggaagtacggaaggaagaggtgctcattctcaggacccagattataaga
gcagcccagcaaaaagacgcaggcagaaatatggaatcaaacctcaagacgcaaaccagc
tggcccaatagtgacaaacatgtggatccagaagatgcaattgaggcctaccatggaatg
tgtcaaactaatcgcaagactgaggactgggggtacctgaatgaagatggagaactcggc
ttggcctatcagggtctaaagcaagtagccaggctccttgaggctcaactccaggaacag
agaagggaatatgaagaagaaatagaagtcctaaaggaccagatggagacattgaaggaa
gcgatggagaaacaacacgaagtcttcctccagacgctccagttgtccccagaagcccaa
gtggagtttggcatccagcaggaaatctcgcggctgaccagcgaaaacctggacctgaaa
gagatgctggagaaactggaaaagaatgagaagaagctgaagaaacagctcaggatttat
atgaagaaagtgcaagattacgaagctgatcaagccgttacacagtctgaaaagcggaaa
cacgaaatcagccgacatgtcaccgtccaaaggaaggaaaaagacttccagggaatgtta
gaatattgcgaagaggatgaatcttcactcataaaaaatctcattacagatctgaagccc
caaacggtatcggccactgtgccctgcttgcctgcctacatcctttttatgtgcatcaga
catgctgattacattaatgatgatcaaaaagtgcattcattgctcacctccactattaat
ggcattaaaaaagtattaaagaaacataacgaggactttgagatgacatcattgtggctg
tccaacacatgtcgccttctacattgtctgaagcaatacagcggagatacgggttttatg
acccaaaataccccaaagcagaatgaacattgcctgaagaactttgacctcaccgagtac
cgtcaggtcctgagtgatctctccatccagatctaccagcaactgatcaaaattgccgaa
ggcgtcttgcagcccatgatagtgactgcggtattggaaaacgaaagcatccagggcctg
tcaggtgtcaagccaatgggctaccgcaaacgaagctccagcagaggggacagcgaaaac
acctacagtttggaagcattcatccgccaactgaacacgtttttaagtatcatgtacgac
cagggccttgacccggagatcatccaacaggccattaagcagctcttctacatgatcaat
gctgtggccttgaacaacctcttgctgaggaaggacatgtgttcttggagcaccggcatg
cagatgaggtttaacatcagccagctggaggaatggttgagagggaagaacctgcatcca
agtggggctgccaaaaccctggaaccactgatccaggcagcacagctcctgcagttgaaa
aagaaaacacctgaagatgctgaggccatctgttccttatgcacatccctcactacccag
cagattgtaaaaatactgaatctttacactcctgtgaacgagtttgaagagcgagtgaca
gtaaccttcataagaaacattcaggcacaattgcaagagcgaaacgatcctccacagctg
ctgttagacttcaaattcatgttcccagttttgtttccattcaatccttcgtctctgacc
atggactctatccacatcccagcttccctcaacctggaattccttaaccgagtttga
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integrated database retrieval system
