Pituophis catenifer annectens (San Diego gophersnake): 139312134
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Entry
139312134 CDS
T11059
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139312134 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pcae01007
]
139312134 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcae03016
]
139312134 (VARS2)
Enzymes [BR:
pcae01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
139312134 (VARS2)
Amino acid related enzymes [BR:
pcae01007
]
Aminoacyl-tRNA synthetase
Class I (U)
139312134 (VARS2)
Transfer RNA biogenesis [BR:
pcae03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139312134 (VARS2)
Prokaryotic type
139312134 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
139312134
NCBI-ProteinID:
XP_070792786
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MPSAHLNSASHRNMSVLCRLLLWAEKRRWDGFGGWRRSYSQGSKPDLNKQVGKMDHLKNK
EQRQKRLWKKMEAIEAQMAAGPKEPSNQDKTLSSKNITEYDIPTIAGQKKDTSAPLPASY
SPRYVEAAWYPWWVKEGFFKPECQQHLPHRKPEMFSISLPPPNITGSLHLGHALTVAIED
ALVRWRRMQGYRVLWLPGSDHAGIATQAVVEKKIWKERGVLRQDLSRDEFLQEVWKWIEE
KGNEIFKQLKEMGASLDWDRACFTMDSCFSQAVTEAFVQLHEQGLIYRDRRLVNWSCALQ
SAISDIEVENRQIKGRTKLSVPGLEDKVLFGVLETFAYKVEGEESMELPVSTTRPETMFG
DVAVAIHPDDSRYLHLHGKSVCHPFTGRLLPIITDPAVEMQMGTGAVKVTPAHNHVDYKL
AQRHNLPLISVIAENGTMTAECGEWVQGLHRFLAREKVLAALKEKGLYRGAKDHCLVLPV
CSRSGDVIEILLKNQWFVRSEAIAQSALEAVESGSLKLIPQFYEKNWRTWLLNINDWCIS
RQLWWGHQIPAYQVMLPESPDLEEQKESDGLWVVGRTEAEARTKAAGLLGKSEQQLELVR
DADVLDTWFSSSLFPFAALGWPHKTEDLQQFFPNNLLETGSDLLFFWVARMVMLGKQLTG
ELPFSQVFLHSLIHDAHGRKMSKSLGNVIDPLDVIHGASLQVLQQKLKDSNLSPRELVIG
SEGLMQNFPQGIAESGSDALRFALCHYDAHGTSINLDMADMEKASHFCNKVWNALKFTFA
ALREDFAPLDPEQVLPSFPMDQWILSRLYHTAEYCAQHFENYKLHSVTNAIYLFWVQDFC
STYLESVKPILRSGDPVHLLPTQQTLYSCVDLALRLLSPFMPFLTEELWQRLPKTDLETS
PSICVARYPSPEHLRHWCNPEEEANFLLVQQIIQVIRSMRATYLLTKARPTIYLACSETA
PWAAYEKYQEPLQTLSLAGSVNLLPNSEEIELPLNCLAVKVNGHTSVYMDVQDLVDPHKE
LLKLTSRQQKLKQQLENLTEKLQKQNSLKAKMNHEQKISLLRSQLQHIEQVLATFQKMAE
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcccatcttaattctgcctcccatcggaatatgtctgttctttgccgtctg
cttctctgggcagagaaaaggcgctgggatggatttggtggatggaggaggagttattcc
caaggaagtaagcccgatcttaataagcaagtggggaaaatggaccatctaaaaaataaa
gaacagagacaaaagcggttgtggaagaagatggaggctattgaagctcagatggctgct
gggcccaaggaaccttcaaatcaagacaagaccctttcctcaaaaaacatcacagaatat
gacatcccaactatagccggacagaaaaaagatacctcagcccctttgcctgcctcctat
agtccacgctatgttgaagctgcttggtatccttggtgggtgaaagaaggtttttttaaa
ccagaatgccagcaacacctgccccacaggaagccagaaatgttttctatctctctcccg
ccacctaatatcacaggatcccttcacctggggcatgccttgactgtggctattgaagat
gctttggtacgatggagacgaatgcaaggctatcgagttctatggcttccaggttctgat
catgctggaattgcaactcaggcagtggtagaaaaaaagatctggaaagaacggggagtt
ttacggcaagatctctcacgtgatgaatttctccaagaagtttggaagtggatcgaggag
aaagggaatgaaatattcaaacagctgaaagagatgggagcatctttggactgggacaga
gcttgctttactatggactcatgtttctctcaagccgtgacagaggcctttgtgcaactc
cacgaacaaggcctgatatatcgagacaggcgcctggtgaactggtcttgtgccttgcag
tcggccatttctgacattgaggtggagaatagacagataaaaggacggacaaagctctct
gtgcctgggcttgaggataaagtgctgtttggagtattggagacatttgcttacaaagta
gaaggagaggaaagcatggaacttcctgtatctaccacccgccctgagacaatgttcggt
gatgtggccgtcgccattcacccagatgactcgcgctatttgcacttgcatggcaagagt
gtgtgccacccattcaccggacgtctccttcctatcattacggatccagcagtggagatg
cagatgggcacaggggctgtgaaggtcactccagcacacaaccacgttgactacaaactg
gcccagaggcacaatttgccgcttatttcagttattgcagaaaacggcacgatgactgca
gaatgtggagaatgggtgcagggactgcatcgattcctggctcgagagaaagtgttggct
gctttgaaggagaaaggactctatcggggtgctaaagaccattgcttagtccttcctgtt
tgcagccgctctggagatgtgattgaaatcctcttgaagaatcagtggtttgtccgaagt
gaagccattgctcaaagcgccttagaggctgtggaatctggatctttgaagctcatcccc
caattttatgagaaaaactggaggacgtggctcttgaacatcaatgactggtgtatttct
cgacaactgtggtggggtcatcagattccagcctatcaggtcatgcttcctgaatcacct
gacctagaagagcagaaggagagcgatggtttatgggtagtgggcaggacagaagcagaa
gctcggacgaaagcagctggcttgctgggaaaatctgaacagcagttggagctggtgaga
gatgctgatgtcttggacacttggttctcctccagccttttcccttttgctgctttgggc
tggccccacaagacagaagacctccagcaattctttcccaacaaccttttggagactggg
agtgatcttctattcttttgggtcgcccggatggtgatgctgggaaaacagctaaccgga
gaactgcctttctctcaggtgttccttcactccttaatccatgatgctcatggcaggaaa
atgagcaaatctctcgggaacgtgattgaccctttggatgttattcatggggcctctttg
caggtcctacagcagaagctaaaggacagcaatttgagtccacgagagcttgtcatcggt
tcagaaggcctgatgcagaattttcctcaaggaattgctgaaagtggctctgatgcacta
aggtttgctctctgccattacgatgcccacggcaccagtattaatctagatatggcagac
atggaaaaagcctcccatttctgtaataaggtgtggaatgccctaaagttcacttttgca
gccttgagggaagactttgcccctctggatccagagcaggtcctcccaagctttccgatg
gaccagtggatcttgagccgactctatcacacagcagaatattgtgcccagcactttgag
aactacaaattgcattctgtgaccaatgctatttatcttttctgggtgcaagatttttgc
agtacctatctggaatctgtcaagcccatcctgaggagtggagatccagttcatcttttg
cctactcagcagactttgtacagttgtgtagacctggctctgcgcctcttgtctcccttc
atgcctttcctcactgaggagctgtggcagcggcttcccaagacagacctggagacgtct
cctagtatctgtgtagccaggtacccaagccctgaacatttgagacattggtgtaaccct
gaggaagaggcaaatttcttgttagtgcagcaaattatccaagtgatacgctccatgagg
gcaacttacctgctgaccaaagctcgaccaacaatatatctggcttgctcagaaacagcc
ccctgggctgcctatgagaaatatcaggagccgttacagacattgtctttggctggatct
gtgaatcttctccccaattctgaggaaatagagctacctctgaactgcctggctgtgaaa
gtcaatggtcatactagcgtttatatggatgtgcaggatttggtggatcctcacaaagaa
ctcctcaaactgacatctcggcaacagaaattaaagcaacagctggaaaatctcacagaa
aaacttcagaagcaaaattccttaaaagccaaaatgaatcatgagcaaaagatttccttg
cttcgttcacagctgcagcacatagagcaagtgcttgccacttttcagaaaatggccgaa
tag
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integrated database retrieval system
