Pituophis catenifer annectens (San Diego gophersnake): 139312192
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Entry
139312192 CDS
T11059
Symbol
USP19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pcae01002
]
139312192 (USP19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139312192 (USP19)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
139312192 (USP19)
Peptidases and inhibitors [BR:
pcae01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
139312192 (USP19)
Ubiquitin system [BR:
pcae04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
139312192 (USP19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
CS
zf-MYND
MYND_ZMYND11_ZMYD8
USP7_C2
Motif
Other DBs
NCBI-GeneID:
139312192
NCBI-ProteinID:
XP_070792883
LinkDB
All DBs
Position
Unknown
AA seq
1418 aa
AA seq
DB search
MSSSASVPGQRRTARGVDDATNKKKQKDRANQESKEGEKPAGSDSKKDLQLEWKQNADEV
IVKLNLGSRNPKVEEVDSSFTDTNCVIKLPDGRQWSCEFYEEIESSCTKIQFKKSNILQL
VLPKKIPLHNWASLSKRHKDGSREHPKRIACKENGKEKALSAGEMSEEPQLDSTVELIRC
KRDPPNPKRSLGKNDTVGGRNPINPRLPTGPGIKAVCIKASLSEEERKSRSMGNPGLSGI
TDHQRTDQVAEGTAQLDLKIEGPERESVCMEMQQPVAPPDALPNQCGPPPEKRLPQLASS
HEASQGVDPASAFREGVPSSLHPRDPETRVWSKDSDALEAVSIEPEPIVNLTFVKNDSYE
KGNDSMVVHVYVKEIHKEMSSVHFREQDFTLMFQTSDANFLRLHQGCSAHSVFRWQVKLR
NLIEPDQCTYNFTTARINICLKKRHSQRWGGLEAPATRGAVGGAKVAMPTGPTPLDKSQP
GSNQHPLSTKEEARAVEKEKPRAEDSGLDSVAARTVSDHLPVKQEPLVPSPKPTCMVPPM
THSPVSNESVEEEEEEEDKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRSF
ESEINYSNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQHDAQ
EFMAFLLDGLHEDLNRIQNKPYTETVDSDGRPDEVVAEEAWQRHKMRNDSFIVDLFQGQF
KSKLVCPVCSKVSITFDPFLYLPVPLPQKQKVLTVYYFAKEPHNKPVKFLVSISKENSTA
MEVLDSVSHSVRVNSENLRLAEVIKNHFHRMFLPSQSLDAVSPTDLLLCFEVLSPELAKE
RVVELQVQQRPQVPSIPITKCAACQKKQLSDEEKLKRCTRCYRVGYCNVVCQRTHWSNHK
TLCRPENIGFPFLISIPESRLTYARLAQLLEGYARYSVSVFQPPFQVGRMPSEQGLPLLS
SEKQEPPVRNSCATVGSAAAASATTVETSTMESGDGARAPHLLQEPQPSLSAPELQPELG
DASTVRSKVSTGRSSGLNLDSGYSESSAESQLESCLERELPYERVPRPEAAIPGYQHPAE
GLSSQVTQFYINKIDATSKEQKLEDKGDAPLDLTDDCSLALVWKNNERMKEFVLVESKEL
ECVEDPGSASEAARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCKQHREASKQLMLWRLP
NILIIQLKRFSFRSFIWRDKINDMVDFPVRSLDLSKFCIGQKDEQQLPMYDLYAVINHYG
GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVD
RPPRGPPHPSDPRADLAQSAEAAASQASLLWQELEAEEDAARRLMRNPWRSCSQRTRKLS
SECPDEGHVRYFVLGTMAAIVALFLNVFYPLIYQTRWR
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagtgccagtgtccctggtcagaggagaacagctcggggagtggatgatgca
actaataagaagaagcaaaaggatcgggccaatcaggaaagtaaggaaggcgagaaacca
gctggcagtgactcaaagaaagacctgcagctggaatggaagcagaatgctgatgaggtt
attgtgaaactgaatttgggcagcaggaacccaaaagtggaagaagtggattcgtctttc
acagacaccaattgtgtcatcaagttacctgatggccgtcagtggagctgtgaattctac
gaggagatagaaagttcctgcaccaaaatccagttcaagaaaagcaatatcctacagctg
gtgctgccaaagaagatcccattgcacaactgggcttcactttctaaacgccacaaagac
ggttcaagagaacatccaaaaaggattgcgtgtaaggagaatggcaaagagaaggccctt
tctgctggggaaatgtctgaagaaccccagcttgatagtactgtggagctaatcagatgc
aaacgagaccctcctaacccaaagcgaagtttggggaaaaatgacactgtgggagggaga
aaccctatcaacccaagactgccaactggacctggtatcaaggcagtgtgtatcaaagcc
agcttgtctgaggaggaaaggaaaagcagaagcatggggaaccctgggctatctggaata
actgaccatcaaagaactgaccaagttgctgaggggactgcccagttggatctaaagatt
gagggtccagagagggaatcggtatgcatggaaatgcagcagcctgtggcccctccagat
gccttgcccaatcagtgtgggccccctccagagaagagactccctcaactagccagctcc
catgaagcttctcagggagtagaccctgcctcggccttcagggagggagtcccttcctct
ctgcatcccagagatcctgagacgagagtctggtccaaggacagtgacgctttagaggct
gttagtattgaaccagagcccattgtgaatctgacatttgtgaagaatgactcctatgag
aaaggaaacgactctatggtagtgcacgtttatgtaaaggagattcacaaagagatgtcc
agtgtacactttcgggaacaagattttacactcatgttccaaacaagtgatgccaacttt
cttcgtcttcaccaaggctgcagcgctcattcagtattcaggtggcaggtgaaactcagg
aaccttatagagccagatcagtgtacatataatttcactacagcccggattaacatttgt
ttgaagaaacgacacagccagcgttgggggggcctggaggctcctgccacacgaggtgca
gtgggtggtgcaaaggttgccatgccaaccggccctacccctctggataaaagccaacct
gggagtaaccagcaccctctctccactaaagaagaggcccgagcagttgagaaggaaaag
cctcgagcagaagacagtggcctggatagtgtagcagctcggaccgtatcagaccacctg
cctgtgaaacaggagccactcgtgccctcgcctaagccaacctgtatggtccccccaatg
acccacagccctgtcagcaacgagagtgtggaagaggaggaggaagaggaggacaagaag
gtgtgtctgccagggtttacaggactggtgaacctgggtaacacctgctttatgaacagt
gttatccagtctctctccaatactcgagagttgcgggactactttcatgatcgctccttt
gagtctgaaattaattacagtaacccgctgggaacaggggggcgcctggccattggcttc
gcggtgctgttgcgggctctctggaaaggcacacaccatgccttccagccttccaagctg
aaggcaattgtagccagcaaggccagccagtttacaggctatgcccagcatgatgcccag
gagttcatggcttttctgctggatggactccacgaggatctgaaccggatccagaacaaa
ccgtacacagaaacggtagactccgatggacggccagatgaggttgttgcagaagaggcc
tggcagcggcacaaaatgaggaatgactctttcattgtcgacctgttccaaggccagttc
aaatccaagctggtgtgccctgtgtgctctaaggtatccatcacttttgatcccttcctg
tatttgccagtcccactaccccagaagcagaaagtgctgacggtctactactttgcaaag
gaacctcacaataaacctgttaagttcttagtgagcatcagcaaggagaattctactgcc
atggaagtcctagactccgtatcccatagtgtgcgagtgaattctgagaacctgcgcttg
gctgaggtgatcaagaaccacttccaccgcatgttcctgccttcccagtcattggatgcc
gtctctcccaccgatcttctgctgtgctttgaagtgctctctccagagctggctaaggag
cgggtggtggagctgcaggttcaacaacgtcctcaggtgcccagcattcccatcaccaaa
tgtgccgcctgtcagaaaaagcagctgtcggacgaagagaagttgaagcgctgcactcgg
tgctatcgagtcggctactgcaatgtagtgtgtcagagaacgcactggtccaaccacaaa
accttgtgccgccccgagaatattggcttcccctttcttatcagcatacccgagtcccgc
ctcacctatgcacgattagctcaacttttggaaggctacgcaaggtactcagtcagtgtg
ttccagccacctttccaggtgggtaggatgccatccgagcaaggcctgcctcttctgtct
tcagaaaaacaagaacctccggtcaggaatagctgcgctacagttgggtctgctgctgcc
gcctccgccacaaccgttgaaactagcaccatggaatctggggacggagcaagggcccca
cacctcttgcaggagccccagccgtctctctccgcccctgagctacagcctgaattaggg
gatgccagcacagtcagaagcaaggtctccacggggagaagctcaggcctaaacttagat
tcaggttactctgaatcatctgcggagtcgcagcttgagagctgtctggaacgggagctg
ccctatgaaagagtccccaggccagaagctgccattcccggttatcagcatccagctgaa
gggctgagttctcaagttactcagttttacatcaataagattgatgcaaccagcaaggag
cagaaactggaggataaaggagatgcccccttggatctgacagatgactgttctctggcc
ctggtgtggaaaaataatgaaaggatgaaggagtttgtattggtcgagtctaaggagctg
gagtgtgtcgaagatccaggctctgccagcgaagcagccagggcaggacacttcaccctg
gaacagtgtctcaatctcttcaccaagccagaggtgttagcccctgaggaggcctggtat
tgcccaaagtgtaagcagcaccgtgaggcatccaagcaactgatgctatggcgtctgccc
aacatccttatcatacagctcaagcgcttttccttccgcagcttcatttggagagacaag
atcaacgacatggtggatttcccagtcaggagcttggacctgagcaagttctgcattggt
cagaaagatgagcagcagttgcccatgtatgatctgtatgcagtaatcaatcactatggg
ggcatgattggtgggcactacacagcctacgcccggctgcctagtgacaagaacagccaa
cgtagtgatgtaggttggcggctctttgatgacagcactgtgactacagtggatgaaagc
caggtcgtgacccgatacgcttacgtgctcttctaccgccgacggaattctcctgtagat
agaccccctcgaggaccccctcatccctcagacccccgtgcagacttggcccaatctgca
gaagcagcagccagtcaggcttctctgctctggcaggaactggaggctgaagaggatgct
gccagaaggctgatgaggaacccttggaggtcttgcagccaaaggacaagaaaactcagc
tcagagtgtcctgatgaaggccatgtccgatactttgtcctgggcaccatggcggccatt
gtggcactcttcctcaatgtcttctacccgctcatctatcagacccgctggaggtag
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integrated database retrieval system
