Pituophis catenifer annectens (San Diego gophersnake): 139312193
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Entry
139312193 CDS
T11059
Symbol
WDR6
Name
(RefSeq) tRNA (34-2'-O)-methyltransferase regulator WDR6
KO
K24737
WD repeat-containing protein 6
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pcae04990
]
139312193 (WDR6)
Domain-containing proteins not elsewhere classified [BR:
pcae04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
139312193 (WDR6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
EIF3I
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
CPSF_A
Beta-prop_DCAF4
SHKBP1_KCTD3_C
PSII_BNR
Motif
Other DBs
NCBI-GeneID:
139312193
NCBI-ProteinID:
XP_070792886
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
METELLLAPITALEMVGDHLIAGEGPYVGIYSLSPDVSLSARCSKQVLQNYTVHGIKEQQ
SLSPGGNQSSTLAIFGGKSFVVVELSFQSSSVELNEVFPFCELHDWIWDLQWMQGRTERP
SSVAVALGHNSVALYDCVGQRVLQEVHCQEKCILYSAHLVGSHWETLVLVAGTVFHQLVV
WHVADQTEDTGRIKPRSRISGHSGVIFSICFLESQGILASASDDRSVRLWSICDLRTPPA
VVPCLLVCYGHQSRVWSVRLLRDYIISIGEDSACLVWTYQGKIVHSFKGHKGQGLRAVAV
DEERGWVFTGGADSGIRHWCLKERSSTGNRLQQLDFPSTGRKGSPRAVKLVDENHLLVMT
DAGAVYSCDLTPKTWALLLEDAAYQSYSLLEVSKPASGGIFCAMGNLSGQVKVFPFSSPA
QSKELNLFEGKVHTLTWATELNRDPNTCNLFASGPAGALLQLEISWHPLGGTTVVVKQCF
LLPVCKQRWHTCIAFLPRGEFLLCGDRRGSLMMFACKPTPGVEEAQGRDEPSCSTSETAC
ALPGFSFPIGSGESHAERPVSLLFGLHGKQGVTSVTCHGGFIYSTGRDSCYRQLQVKDRQ
LQVLRKQKPCKDLEWLEELRFGPNGSLRVLGFHATHFVIWSASSSEKLLCIPCGGGHRSW
SYARCLSVETFAYIKSGEIWLYQSKDASSGQRILKAALHGKGMTCVCHVGTLEAPGRETI
SVFATGSEDNTVNVLAFNVQTRRVTQLAALGDHISSIRALTVVQNGLSQPERERISAMLF
SAGGRAQIECYRLALSPKPGSSSGVACQLVHVASHRLDEQWDYKKNKHKLIKMDPETRYM
SVVVLARMEEVELPGPLCFLAAACSDGSVRLFLLLENAKKLCLVAESFHHQHCVLKVEAF
AYKMASGRRSHFMGSAATDGSIAFWDITAALGHFSAIVKTGDIQMKPLALESPVLTVQAH
SCGVNSLHIQKTAERRFVVVSGGDDGSISVHVIEVKAESAAVGQATPARAGIQVIRKVSR
LCAHAAHVTGVRLLHLNFLLSASVDQRLTLWSLCEDSLSFVWSKFCHVADVAALECWETE
GHSCHGVICGQGLQVLSWGLDARGGEIKEGI
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagaactactattggctcctataacagctctggagatggtgggagatcatctt
atagcaggagaaggaccctatgtaggcatatatagcttgtcgcccgatgtcagcctgtca
gcaagatgctccaagcaggtccttcagaactatactgtccatggtattaaggagcagcag
agtttgagtcctggaggtaaccaatcctcaaccctggctatctttggaggcaaaagcttt
gtggttgtagagctcagcttccagagcagctcagtggaactcaatgaagtctttcctttc
tgtgagctgcacgactggatctgggacctgcagtggatgcaaggcaggactgagaggccc
agcagtgtggctgtggccttgggacacaattcagtggcactatatgactgcgtcggccag
agggttctccaagaagtgcactgccaagagaagtgtatcctgtattctgcccacttggtg
gggagccactgggagacgttggttctggtggctggcaccgtctttcatcagttggtggtc
tggcatgtggctgaccagacagaagacactggaagaataaagccccgcagcaggatcagt
ggacacagcggcgtcatcttcagcatttgcttcttggaaagccagggcatcctggcctct
gcctccgacgacaggagtgttcggctctggagcatctgtgacctcagaacacctcctgct
gtggtcccgtgcttgctggtgtgctacgggcaccagtccagagtctggtcagtaagactg
ctgagggactacatcatcagcattggtgaggattcagcctgtcttgtgtggacttatcag
ggcaagattgtccacagcttcaaaggacacaagggccaaggactccgggcggtggctgtg
gatgaggagcgaggctgggtgtttacagggggagccgattcgggcattagacactggtgc
ctcaaggaaagaagcagcactggaaacaggctccagcagctggattttccttccactggc
agaaaaggatcccccagggcagtaaaactggtggatgaaaaccatctgctggtgatgacc
gatgccggggctgtctattcctgtgacttgactcctaaaacttgggcactgctcctggag
gatgctgcttatcagtcttacagtctcttggaagtgtccaagcctgccagtggaggcatt
ttctgtgccatgggcaacttgtcagggcaggtgaaagttttcccgttcagcagtcccgca
caaagcaaggagttaaacctctttgaagggaaagtgcacactttgacttgggccacggag
ctaaaccgggaccccaatacttgcaacctctttgcttctggcccggctggggctttgctg
cagctggagatctcttggcacccacttgggggaacaacagtggtggtaaagcaatgtttt
ctcctgccggtctgtaagcagcgatggcacacctgcattgcttttttgccccgaggagag
tttctgctttgtggcgaccgcagaggctctcttatgatgtttgcctgcaagccaactccg
ggagtggaagaagcacaagggagagatgaacccagctgttctacttcagaaaccgcctgt
gccttgcctggattttccttccctattggaagtggagagtcccatgccgagaggcctgtt
tctctgcttttcgggcttcatgggaaacagggggtgacctccgtaacctgccacggcggc
tttatttacagcacggggagagacagctgctatcgccagctgcaagtgaaggatcggcag
ctccaagtgctgaggaagcaaaagccgtgcaaagacctagaatggctggaagagctacgc
tttggccccaatgggagcctgagggtgctcggcttccatgctacccactttgtaatttgg
agcgccagcagcagtgagaagctcctctgcattccctgcgggggtggccaccgttcctgg
agctacgcccgctgcctttccgtggagacctttgcgtatatcaaatctggggaaatttgg
ttgtaccaaagtaaagacgcctccagtgggcagcgaatcctgaaagctgctctgcacggc
aaggggatgacatgtgtgtgtcacgtcggtaccctggaagcccctgggcgagagacgatc
agtgtttttgctacaggaagtgaggacaatacggtgaacgttctcgcttttaatgtgcaa
actcgcagagtgacccagctcgctgctcttggcgaccacatctccagtataagagctctg
actgtggtccagaacggccttagtcagcctgagagggaaaggatctccgccatgcttttt
tctgcagggggacgagcccagatcgagtgttaccgattagcgctcagccctaagcctggt
tccagcagcggggtagcctgtcagctggttcatgtggcatcgcatcgtttagatgagcag
tgggactacaagaagaataagcacaaactcatcaagatggatccagaaaccaggtacatg
tctgtggtggtacttgctaggatggaagaggtggaattgcctggtcccttgtgcttccta
gctgctgcttgtagtgatggatctgtccgactgttcctgctgcttgagaatgccaagaag
ttgtgtcttgtagcagaatcctttcaccatcagcactgtgtcctgaaggttgaagcattt
gcctacaagatggctagtgggagaaggagtcactttatgggcagtgcggccactgatggt
agcattgcattttgggacattactgctgccctcggccatttttcagcaatagtaaagaca
ggagacattcagatgaaacctctagccctggaatctccagtcctgaccgttcaggctcac
agctgcggtgtgaacagcctccacatccagaaaacagccgagagacgttttgtggtagtc
agtggcggtgatgacgggtccatctctgtccatgttattgaggtgaaggctgaaagcgct
gctgtgggccaggcgaccccagccagggctggcatccaagtgatcagaaaagtatcgagg
ctttgcgctcacgcggctcacgtgacaggagtgaggctcctccatctgaacttcctcctt
tctgcgtcagtggaccaacgcttgacactctggagtctctgtgaggacagcttgtctttc
gtatggagcaaattctgccacgtggccgatgtggccgctctggagtgttgggaaacggaa
ggacacagctgtcacggtgtgatatgtggtcaggggttgcaagtgctttcctgggggctg
gatgcgcgagggggagaaataaaagaggggatctga
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