Pituophis catenifer annectens (San Diego gophersnake): 139312404
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Entry
139312404 CDS
T11059
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
139312404 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139312404 (UIMC1)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
139312404 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
139312404
NCBI-ProteinID:
XP_070793255
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MEKMPKKKRKTANEPDSKDQGEEEEARDLSNAKLTHSADTFIIISDSDGEQESKEEHDLQ
KKRTKQQLDRVKFTAKRKITQMSEDEQFALALKMSEQEAKQLNSQEEEEEELLRKAIAES
LSSCQASEFAAAAPLPLLSEALGSPGQNHPSGPEDSQLLAVSPPCSESPCSKCSSLFPSD
KTDENTETHVTKSPLVVLTRLSQDIVESSLVSSIIVSPGKSQTFARSGTSSPAGNCSSDT
SCSSEEELPIILSPTFPQRPRRSWQLEPRRLFMGKCSLLTPTSKEMEHSQNYLKGNLHVD
CPGVLQKEAQQQSTFDHDTSPEFRDPAEHGKNTLLSSELIERTVLPESASAICTLPWTDE
KCQHEEPDVVHYYWGVPFCPKGIDPNKYTQVIMCQLEVYQKSLKQAQRQLLQKKPFGEPI
VPNSCSLRQIKLTKDKETSRQREDTDDQDGEDMDEKKEPDNVAWLLSRVNGESYKHPAGD
VAEGRNSECGDESASSSLQASQVLFAEDMLEEREPVQITQSICALTPLDNTKNPDIATED
HAEEEITVCPETQQSPSQAVESESGEIHSSSKDVFLQADEDAREHAPGHSPQADNLLSCP
LCELRFPASEIELHAMNCNGTGEDAVEDGPVMTRRQREAKSKLASRKKASESVDIDKYEK
CYLCKSLVLRKEYQSHVDGCLCSRNVDGTQGHRRPRQAKEKGRCEGGLLSMLEQSENKTA
DAEMAALPSRREDSRPSSTEMEKETEGNQKSERFFPQGSCSDSPIKSFTSISEAKDCLVD
FKKQLAIKPRTWKQTKASHRNQKKY
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatgccaaagaagaagcggaaaactgcaaatgagcctgattccaaagatcag
ggagaagaagaagaggcaagggacctgtcaaatgcaaagttaacacattctgcagataca
ttcattatcatatctgacagcgatggagagcaagagtccaaagaggagcatgatctgcag
aagaaaagaacaaaacagcagctggatagagtgaagttcaccgcaaaaagaaaaattaca
cagatgtcagaagatgaacaatttgccttggctttaaaaatgagtgagcaagaagccaaa
cagttaaattcacaagaggaggaagaggaagaacttctgagaaaagccattgctgagagc
cttagtagttgccaggcttctgagtttgctgctgctgctcccttgccgctcctttccgag
gcattagggtctccaggtcaaaaccacccatctggaccagaggattctcagctccttgca
gtttcgcctccttgctctgagtctccttgctctaagtgcagctccctctttccaagtgac
aaaactgatgagaacacagagacacatgtcaccaagagtcctctggtagtactgacaagg
ttaagccaggacatagttgaaagctcactagtttctagcataattgtatctccggggaag
agccagacttttgcaagatcaggcacttcctcaccagctgggaactgctccagtgataca
tcatgtagttcagaagaggagttacctattattctaagtcccacctttccacaaagacct
cggaggtcttggcagctggaaccccggagactgtttatgggaaaatgcagccttctaaca
ccaacaagcaaagaaatggaacattcccaaaattacttaaaaggaaaccttcatgttgac
tgcccaggagtcctacagaaggaagcccagcaacagagtacatttgatcatgacacaagt
cctgagttcagagatccggctgagcatggcaaaaatacactgctttcttctgagcttata
gaaaggactgttctaccagaaagcgcctcagcaatttgcacacttccttggactgatgag
aaatgccaacatgaagaaccggacgtggtgcactattattggggtgttccattctgcccc
aaaggaatagatcctaacaaatatactcaagtcatcatgtgccagcttgaggtttaccag
aaaagcctgaaacaggctcagcggcagctcctgcagaagaagccgtttggagaaccaatt
gttcctaattcatgttccttgagacaaattaaacttacaaaagacaaggaaacatcaaga
caaagagaagatactgatgatcaagatggggaagacatggatgagaaaaaggaacccgat
aatgttgcttggcttctttcccgagtaaacggagagtcttacaaacatccagcaggggat
gtagcagagggaagaaactctgagtgtggagatgaatcagcaagcagctctcttcaggct
tctcaagtgctgtttgcagaagatatgcttgaagaaagggagcctgtacaaattacacaa
agcatttgtgccttgactcctttggacaatacgaagaacccagacattgccacagaggat
catgctgaggaggaaatcactgtatgccctgaaacccagcagagtccatcacaagctgtt
gagtctgagagtggagaaatccattcatccagcaaagatgtctttctgcaggctgatgaa
gatgcaagagagcatgcacctgggcacagccctcaagctgataacctcttgtcatgtccg
ctgtgtgaactcagattcccagcttcagaaattgagctacatgctatgaattgtaacggc
actggagaggacgcagttgaagatggtccagtaatgacccgacgacagagggaagccaag
agcaagcttgccagccgaaaaaaagcctccgaatctgtagatattgacaagtatgagaag
tgttatctttgtaaatctctagtgctaaggaaagagtatcagagccatgttgatggctgt
ctttgtagccggaatgttgatggaacccagggccacaggaggccgcgccaagcaaaagag
aagggaaggtgtgaaggtggattactgagtatgctagaacaatctgaaaacaagactgca
gatgcagagatggctgctctaccatccagaagagaagactcaaggcccagctcaacagaa
atggagaaggaaaccgagggcaaccagaaatcagaaaggttcttccctcaaggatcctgc
agtgactctcctattaagtcattcacttccatttctgaagccaaagattgcctagtggac
tttaaaaaacagttggcgataaagccacgcacttggaaacagaccaaagccagccatcgg
aaccaaaagaagtactga
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