Pituophis catenifer annectens (San Diego gophersnake): 139312540
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Entry
139312540 CDS
T11059
Name
(RefSeq) transitional endoplasmic reticulum ATPase-like
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04137
Mitophagy - animal
pcae04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139312540
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139312540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139312540
03009 Ribosome biogenesis [BR:
pcae03009
]
139312540
04131 Membrane trafficking [BR:
pcae04131
]
139312540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcae04147
]
139312540
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
139312540
Ribosome biogenesis [BR:
pcae03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
139312540
Membrane trafficking [BR:
pcae04131
]
SNARE
SNARE associated proteins
Others
139312540
Autophagy
Aggrephagy
Other aggrephagy associated proteins
139312540
Exosome [BR:
pcae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
139312540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_22
AAA_33
AAA_2
TIP49
RNA_helicase
AAA_28
AAA_14
NPHP3_N
Vps4_C
nSTAND3
Mg_chelatase
AAA_17
Parvo_NS1
AAA_18
ATPase
ATPase_2
IstB_IS21
AAA_7
ABC_tran
DUF815
AAA_24
AAA_lid_PRS2_C
ResIII
TsaE
Sigma54_activat
Viral_helicase1
NB-ARC
NACHT
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
139312540
NCBI-ProteinID:
XP_070793512
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MPATGGDPKGEDYSTAILRQKHRPNRLIVDEAANEDNSILSLSQAKMEELHLFRGDTVLM
KGKKRRETVCIVLTDDTCQNEKIRMNRVTRNNLRVRLGDVVSVQACPDVKYGKRIHVLPI
DDTIAGLTGNLFEVYLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVEVDPSPHCIVAPD
TIIHCEGEPIKREDEEESLNDVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPR
GILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPA
IIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRSHVIVMAATNRPNSIDPALRR
FGRFDREIDIGIPDSVGRLEILQIHTKNMKLADDVDLEKVANETHGHVGADLAALCSEAA
LQAIRKKMSVIDLEDDTIDADILNAMAVTMDDFQWALGQSNPSALRETVVEVPQVSWDDI
GGLQEVKRELQELVQFPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQANF
VSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGAGDGGGAADR
VINQILTEMDGMTNKKTVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDDKSRVAILQA
NLRKSPVAKDVDLNYLAKITHGFSGADLTEICQRACKLAIREAIEMEIKAERERQRQKYA
AMDDDYDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSGKQT
SGGGGSSGSNSGQGSLFQEEGEDDLYN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccacgggaggggaccccaagggagaggattactccacagccatcctgcgccaa
aagcatcgtcctaatcgcctcattgtagatgaagcagccaatgaagacaacagtattttg
agtctgtcccaggccaaaatggaagaactgcacttgttccgtggagacacggtgctaatg
aagggaaagaaacgcagggagacagtatgcattgttcttactgatgacacctgccagaat
gagaagattcgaatgaaccgcgtcacccgtaacaacctccgtgtgcgccttggagatgtg
gtcagtgtacaggcctgtccggatgtgaagtatggaaagaggattcatgtactccccatc
gatgacactattgcagggttgactgggaacctctttgaagtttacctcaaaccatacttt
ctggaagcctatcgtcctgtacataaaggtgatatcttccttgtacgtggtggaatgagg
gctgtggaatttaaggtggtggaagtagatcccagtccccactgcattgttgctcctgac
acaattatccattgtgagggggagcccatcaaacgagaggatgaagaggagagcctcaat
gatgttggctatgatgacatcgggggctgccgtaaacagttggctcagatcaaagagatg
gtagaactgccattgagacacccagcactcttcaaagcgattggagtgaagcctccaaga
gggattcttctttatggcccccctggaactgggaaaacacttgtagctcgggcagttgca
aatgaaactggagcattttttttccttatcaatggcccagagatcatgagcaagctggct
ggggaatctgagagcaacttacgcaaagcctttgaagaggctgagaagaatgctccagct
attatctttattgatgaactagatgctattgctcccaagagggagaagacacatggggaa
gtggaacgccggattgtttcccaactcctgaccctcatggatggcctgaagcaacgctct
catgtcatagttatggccgccactaaccgaccaaacagtattgatcctgctttgcgtcga
tttgggcgctttgatcgagaaattgacattggaattccagattcagtgggaaggctggaa
atcttacagatacataccaagaacatgaaactggctgatgatgtggacctggagaaggtg
gccaatgagacccatggtcatgtgggtgctgatctggcagcattgtgttccgaggcagca
ctccaagcaatccgtaagaagatgagtgtcattgacctggaggacgatacaatcgatgct
gacatccttaatgctatggctgtcaccatggatgatttccagtgggctcttggccagagc
aacccttcggccctaagggagaccgtagtggaagtgccgcaggtctcctgggatgacatt
gggggcttgcaggaagtgaaacgtgagctacaagaactggtgcagttcccagtggagtat
ccggacaagttcctgaagtttggaatgacaccttcacgaggtgtgctgttctatgggccc
cctggctgtggcaagaccctcctggcaaaggccattgcaaacgaatgtcaggccaacttt
gtctccatcaagggtcctgagctactcaccatgtggtttggagagagtgaagccaacgtc
cgtgatgtttttgacaaggcccgccaggctgctccctgcatcctgttttttgatgagctg
gactccattgccaaggcccgaggtggtggagcaggggatggtgggggtgcagctgaccgt
gtcatcaaccaaatcctcacagaaatggatggcatgaccaataagaagacagtatttatt
ataggtgccaccaatagaccagacatcattgacccagccatccttcgtccaggacgtctg
gaccagctcatctacatcccattacctgatgacaagtctcgtgtagcgatcctccaagcc
aacttgcgaaaatcaccagttgccaaggatgtcgacttgaattatctagctaagatcaca
cacggcttctctggtgctgacctcaccgaaatctgtcagcgtgcctgcaagcttgccatc
cgtgaggccattgagatggagatcaaggcagaacgggaacgccagcgtcagaagtacgct
gccatggatgatgattatgacccagtgccagagatccggcgggatcactttgaagaagca
atgcgctttgcacgccgttcggttagcgataatgatatacgcaaatatgagatgtttgct
cagacgttacagcagagccgtggctttggcaacttcaggtttccatcaggcaagcagacc
agtggtggagggggcagcagtggcagcaacagcgggcaaggaagcctcttccaggaggag
ggagaagacgacctctataactga
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integrated database retrieval system
