Pituophis catenifer annectens (San Diego gophersnake): 139312666
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Entry
139312666 CDS
T11059
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03013
Nucleocytoplasmic transport
pcae03015
mRNA surveillance pathway
pcae03040
Spliceosome
pcae05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139312666 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
139312666 (ALYREF)
03015 mRNA surveillance pathway
139312666 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139312666 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139312666 (ALYREF)
03041 Spliceosome [BR:
pcae03041
]
139312666 (ALYREF)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139312666 (ALYREF)
TREX complex
139312666 (ALYREF)
Spliceosome [BR:
pcae03041
]
Complex C
Other components
EJC/TREX
139312666 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
139312666 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
139312666
NCBI-ProteinID:
XP_070793746
LinkDB
All DBs
Position
Unknown
AA seq
255 aa
AA seq
DB search
MGDKMDMSLDDIIKLNRSQRGGGGRAGGGRGRGRGATGRGGGGGAGRGGAGRAGGGGPVR
NRAALSRGGGRNRPAPYSRPKQLPEKWQHDLFESCFGPGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNCVPLDGRPMNIQL
VTSQIDTQRRPIQSVSRGGMTRNRGGSGGFGGGNRRGSRGNRGRGRGAGRSSKQQLSAEE
LDAQLDAYNARMDTS
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaaatggatatgtctttggacgacattatcaagctgaacaggagtcagcga
ggcggaggtggccgagccggcggtggtcgaggccggggaagaggagctacaggtcgagga
ggaggaggaggagctgggcgaggaggagctggacgcgcaggtggaggcggacccgtccgg
aacagagccgctctgtcccggggaggcggcaggaacaggcccgcgccctacagccggcca
aaacaactccctgaaaagtggcaacatgatttgttcgagagttgctttggccctggcgct
ggcgtggaaacgggtggaaagctcctcgtctctaatctggattttggtgtttcggatgca
gacatacaggagctttttgcagaatttgggacactaaagaaggcagcagtacactatgat
cgttctggacgtagtctaggtactgcagatgttcattttgagaggaaggctgatgctctg
aaggctatgaagcaatacaattgcgttcccttggatggacgtcccatgaacattcagctg
gttacatcacagatagatacacagaggagaccaatacagagtgtaagtagaggcggtatg
acaagaaaccgtggtggctcaggtggttttggcggtggcaacagacgaggcagtcgtggc
aatagaggcagaggcagaggtgctggtaggagttccaaacagcagctctctgcagaagaa
ttggatgcacaattggatgcttataatgctaggatggataccagttaa
DBGET
integrated database retrieval system
