Pituophis catenifer annectens (San Diego gophersnake): 139312702
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Entry
139312702 CDS
T11059
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
139312702 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcae02000
]
139312702 (ABCA5)
Transporters [BR:
pcae02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
139312702 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
AAA_23
AAA_15
MMR_HSR1
cobW
Rad17
Motif
Other DBs
NCBI-GeneID:
139312702
NCBI-ProteinID:
XP_070793814
LinkDB
All DBs
Position
Unknown
AA seq
1657 aa
AA seq
DB search
MSTDDSRQKGVWRQTRTLFYKNCLVKWRTKKSSVQEILLPLFFLFWLILLSMMYPNKKYD
EVRDSDLYSVDHSSISEFVVGYTPVNNLTRKIMHKMSAEYFTEGITTEEFLTEQEMQEAT
FRSPQNFVGVIFKDSMSYQLRFPPTKVPVSAIHMESRASCPNPSKICEAETYWRYGFTAL
QICIDAAIIQLKTNYSVLEQLEQTKAVMMGESAILEIDNFPRAIILIYLVIAFSPFGYYL
AIHIVAEKEKKIKEFLMIMGLHDTAFWLSWVLLYTSLIFVMSLLMSVIATFSSLFPKSSS
FVIFLLFFLYGISSVFFAFMLTPLFKKSKHVGTVEFLSTLAFGIVGLTIFLVEDIPKSFV
WLVSPLCQCTFLIGVAQVMHLEDYEEGVNFSNLTYGPYPLIIAILLLALDSVLYLLLAVY
LDQVIPGEYGLRRHFFFFLKPSFWSKRTKNYKELYESNINGNLDFNEIIETVSSEFQGKE
AIRINSVQKSFVKKGETVEILKNLSFDIYEGQITALLGHNGTGKTTLMNILCGLCPPSDG
FASIYGYRVSEIDEMLDARKITGVCQQIDVYFDVLTVEENLSIVAAIKGIPPNYVIQEVQ
KILLDLDMQPIKDNQAKKLSGGQKRKLSIGIAILGDPKVLILDEPTAGMDPCSRHTVWNL
LKNRKANHVTVFSTHFMDEADILADRKAVISQGMLKCLGSSLFLKTKWGIGYRLSMHIDR
YCNTEATASVIRQHIPGSSLLKQNEEQLIYALPFKDMDKFSALFADLDTHAHLGVISYGV
SMTTLEDVFLKLEAEAEIDQADFSIFNSEKVEEEMDTKSTDELEQTLLMLSEVKSCVVNK
KSLWKKQVTTMAKVHFLNLKREIKSVAVVFLLFTLFLVIQIFMFVVHHYLKKAVVPIQLS
PNLYFLKTNETYDKYKTSLLIQNSTGSNIDDLISALRNQNILTEVLSDSDCESADFHNTA
LNNSVYVSLAPHSAALNVCKVDKSYSFTAAFNRTMIHSLPVMMNIISNFYLYSANITEKI
EVWSNPFFQEITDTVFTIVLYFEAVLLGVLVTGMPSYFAMENAENHKTRAYTQLKISGLY
PSAYWCGQALIDIPLFYIILLLMVGSLFVFHHGVYFFPEKFLAVIFCLIGYVPSVVMFNY
IVSFSFNAIQNTKEFWSFIFSVAALVCSVVIEVAFFMWYYTTAAVLHVCFSIFVPIYPLI
GCLISFIKIVRKLDNKMEKHSERLLISVVAPYLQCVVWLFLLRYLEMKCGGKSVRKDPFF
RTPMKPKTWKLPDVLHDENEDEDVTAERLRVKELITCQSYEEKPAVLVHCLHKEYDEKSD
FLLGRKIKTVATNRVSLCVKKGEILGVLGPNGAGKSTLINILVGEVEPNAGQVLMGDFSS
GDNNEDDSMRFVGYCPQTNPLWPEITLQEHFEIYGAIKGMSKSDLKEVIKCISSALDFKE
QLQKKVKKLGAGVKRKLCFALSMLGSPHITLLDEPSTGMDPKAKQHMWKAIRAAFKSKKR
AAILTTHYMEEAEAVCDRVAILVSGKLRCIGTIQHLKTKFGKGYFLEMKLKEVPDLQMKE
QVQRAVLRMFPNGRPQESFRSILSYKIPKEDVHSLALSFSKLEEAKHAFNIEEYSFSQAT
LEQVFVELAKEQEEEDSFGTLNSMLWWERTQGERVVF
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagatgattcaagacaaaaaggagtgtggcgacaaacaagaacacttttttat
aagaattgcttagttaaatggagaaccaagaagagtagtgttcaggaaatactgcttcca
cttttctttttattctggctaatattattgagcatgatgtatccgaataagaaatatgat
gaggtgcgtgattctgatctttattctgtggatcactctagtatctctgagtttgttgtt
ggctacacaccagtgaacaatctgacgagaaaaatcatgcacaaaatgtctgcagaatat
tttacagaaggaatcactactgaagaatttctaactgagcaagaaatgcaagaggctaca
tttcgtagtccccaaaactttgtgggtgtaatatttaaggattctatgtcttatcaactc
agatttcctcctacaaaggttcctgtttctgcaattcacatggaatcaagagccagttgt
ccaaatccttccaagatatgtgaagctgaaacctactggcgatatggatttacggcgctc
cagatctgcattgatgcagctattattcagctgaagaccaattactcagttttggaacaa
ctggaacaaacaaaagctgtcatgatgggggaatctgctattttggaaatagataatttt
cctcgtgccatcattctgatttacttagtaattgccttttcgccttttggttattacttg
gcaatccatattgtggcagaaaaagagaagaaaataaaagaatttttaatgataatgggc
cttcatgacactgccttttggctttcttgggtcctactgtacaccagtctgatatttgtc
atgtctcttcttatgtcggtcattgcaacattctcttcgcttttccccaaaagtagcagc
tttgtgatatttcttctttttttcctgtatggaatatcttccgttttctttgcattcatg
ttgactcctcttttcaaaaaatcaaaacatgtcggtacagttgagtttttgtcaaccctg
gcttttggtattgtgggtctgacaattttcctggtagaggatattccaaaatcctttgtg
tggctggtaagccctctgtgtcaatgcacatttttaattggcgttgcacaggttatgcat
ttagaagattatgaagaaggagttaatttttcaaatttaacttatggaccttatccactt
attattgctatactgctcctggctcttgacagtgtgctttatctactattagcagtttac
ttggatcaggttattccaggagaatatggattgcgtagacatttttttttctttctcaag
ccctcattttggtcaaagagaacaaaaaattacaaagaattgtatgaaagcaatattaac
gggaacttagatttcaatgagatcattgaaaccgtatcatcagagtttcaaggaaaagaa
gctatcagaatcaactctgtccagaaatcttttgttaaaaaaggtgaaactgtggagatt
ttaaaaaatttatcctttgatatatatgagggccagattacagcattacttggacataat
ggaactggcaaaacaacattaatgaacattctgtgtggattgtgcccaccttctgatgga
tttgcatcgatctatggatacagagtttctgaaattgatgaaatgctagatgccagaaag
ataactggagtatgtcaacaaatagatgtatattttgatgtattaactgtggaagaaaat
ttgtcaatagttgctgcaattaagggaatacctcccaattatgtgatacaagaggtccaa
aaaattttattggatttggatatgcagcccattaaagataaccaagcaaaaaaactaagt
ggtggacagaaaagaaagctgtcaatcggaattgcaattcttggtgatccaaaggtgtta
atcttggatgagccaactgctggtatggatccatgctcccgacatacagtttggaacctc
ttgaaaaacagaaaagccaaccacgtgacagtgttcagtacccatttcatggatgaagca
gacattcttgcagatcggaaagctgtaatttctcaaggaatgctgaaatgtcttggatct
tcccttttccttaagacaaaatggggaattggctatcgtttgagtatgcacatagatagg
tattgtaacacagaagctacagcatctgtcatcagacagcacatccccggatcaagtttg
ctaaaacagaacgaagaacaactgatatatgcattaccatttaaagatatggacaaattt
tcagcgctgtttgctgatctagatacccatgctcatttgggtgttatttcttacggtgtt
tccatgacaaccttggaggatgttttcctcaagttggaagctgaagcagagattgaccaa
gcagattttagtatattcaactcagaaaaagtagaagaagaaatggatacaaaatctact
gatgaattagagcagaccctactaatgctctctgaagtaaaatcttgtgtggtgaacaag
aaatctctctggaaaaaacaagtcacgactatggcaaaggttcatttcctcaacttaaaa
cgtgaaattaagtcagtggcagtggtatttttgttatttacactgtttcttgttattcag
atttttatgtttgttgtacatcactatttgaaaaaagctgtagtccccatacagctatct
ccaaatttatattttcttaagaccaatgaaacatatgacaagtacaaaactagtctcctt
attcaaaactccactgggtcaaacatagatgacttaattagtgctcttagaaaccagaat
atacttacagaggtactcagtgacagtgattgtgaatcagcagatttccacaatacagca
ttaaacaacagtgtatatgtgtcgcttgccccacatagtgcagcattaaatgtatgtaaa
gtagacaagagttatagctttactgctgcttttaatcgcaccatgatacattctttacct
gttatgatgaatattattagcaacttctatctatacagtgcaaacataactgaaaagatc
gaagtttggagtaaccctttctttcaagaaatcactgacacagttttcactattgtgctg
tattttgaagctgtcttactaggagttcttgtcactggaatgccatcatattttgccatg
gagaatgcagaaaaccacaagacaagagcttacacccaacttaaaatctctggactttat
ccttctgcttattggtgtggacaagcactaattgatatcccattattttatataattctt
cttcttatggtaggaagtttatttgtatttcatcatggagtttattttttccctgaaaag
tttcttgctgtgattttttgccttattggctacgtaccatctgttgttatgtttaattat
attgtctccttcagctttaatgccatacaaaataccaaagaattttggtcatttattttt
tcagtggctgctttagtttgctctgttgtcatcgaagtagccttctttatgtggtattac
acaacagccgctgttcttcatgtgtgtttttctatttttgttcccatctatcctcttatt
gggtgtctcatttcttttataaagatagtgcggaaacttgataacaagatggagaagcat
tcagaaagattgttgatttctgttgtagcgccatatttgcagtgtgtagtttggctcttt
cttctgcgttatcttgaaatgaagtgtgggggaaagtcagtaagaaaagatccatttttc
agaacacctatgaagcccaagacctggaaactgccggatgtgctgcacgatgagaacgag
gatgaagatgttacagcagagaggctgagagttaaagagttgatcacttgtcaaagctat
gaagagaaaccagcagttttagtccactgtttgcacaaagaatatgatgaaaagagtgat
tttctccttggaagaaaaataaagacagtggcaactaatcgtgtttccctttgtgtaaaa
aaaggggaaatactgggagtgttaggtccaaatggagctggaaaaagtacgctaataaat
attctggtgggagaagttgaaccaaatgcgggccaggtgctgatgggagacttttcttca
ggtgataataatgaagatgattccatgaggtttgtggggtactgtccacagacaaaccca
ctttggcctgaaatcacattacaggaacattttgaaatatatggtgccatcaaaggaatg
agcaaaagtgacttgaaagaagtcataaaatgcatctccagtgcacttgactttaaggag
cagctacagaaaaaagtaaagaaacttggagcaggagtcaaacgaaagctatgttttgcc
ttaagtatgctgggtagtccccacattactctactagatgaaccatctactggtatggac
cccaaagcaaaacagcatatgtggaaagccatccgagcagcctttaaaagtaaaaagaga
gcagctattctgactactcattacatggaagaagcagaagctgtgtgtgatcgagtggct
atcttggtgtctggaaaattgaggtgcattggtacaattcaacacctcaagactaaattt
ggcaaaggatatttcttagaaatgaaattaaaagaagttccagatttacagatgaaggaa
caggtccagagggcagttttgcgtatgtttcccaatggaagacctcaggaaagttttagg
tcaattttatcatacaaaatcccaaaggaagatgtccactcacttgccctgtctttttcc
aaacttgaggaagcaaaacatgcctttaatattgaagagtacagcttttctcaagcaacc
cttgaacaggtttttgtggaacttgccaaagagcaagaagaagaagacagctttggaaca
ttaaatagcatgctttggtgggaacgaacccaaggagaaagagttgttttctga
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integrated database retrieval system
