KEGG   Pituophis catenifer annectens (San Diego gophersnake): 139312727
Entry
139312727         CDS       T11059                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
pcae  Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04137  Mitophagy - animal
pcae04144  Endocytosis
pcae04145  Phagosome
pcae04148  Efferocytosis
pcae05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:pcae00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139312727 (RAB5B)
   04145 Phagosome
    139312727 (RAB5B)
   04137 Mitophagy - animal
    139312727 (RAB5B)
   04148 Efferocytosis
    139312727 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139312727 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pcae04131]
    139312727 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcae04147]
    139312727 (RAB5B)
   04031 GTP-binding proteins [BR:pcae04031]
    139312727 (RAB5B)
Membrane trafficking [BR:pcae04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    139312727 (RAB5B)
 Endosome - Lysosome transport
    139312727 (RAB5B)
Exosome [BR:pcae04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139312727 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   139312727 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   139312727 (RAB5B)
  Exosomal proteins of melanoma cells
   139312727 (RAB5B)
GTP-binding proteins [BR:pcae04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    139312727 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 139312727
NCBI-ProteinID: XP_070793853
LinkDB
Position
Unknown
AA seq 214 aa
MTSRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPNIVIALAGNKADLANKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQSTGGAVGRRGVDLHEQSQQNKSQCCSN
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaccagcagaggagctgccaggccgaatgggcagtcgcaagccagcaagatctgccaa
ttcaagctagtactgttgggtgaatcagcggtaggcaagtccagcctggtgctgcgtttt
gtcaaggggcagttccatgaataccaagagagcaccattggagcggctttcctcacacag
tctgtctgtctagatgatacaacggtaaagtttgaaatctgggatacagctggtcaggaa
agatatcacagtttggctccaatgtattaccgaggggctcaggctgccattgtggtatat
gacataaccaaccaagaaacatttgcacgagcaaaaacatgggtgaaagaactccaacgg
caagctagcccaaatattgttatagccttagcaggaaataaggctgatcttgccaacaag
cgcatggtagaatatgaagaggcccaggcttatgcagatgataacagtctattgtttatg
gagacatcagccaagacagcaatgaacgttaatgatctcttcctggcaatagctaagaag
ctgccaaagagtgagccccagagcacagggggtgctgtggggcggcgaggtgtggacctt
catgagcagtcccagcagaacaagagccagtgttgtagcaactga

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