Pituophis catenifer annectens (San Diego gophersnake): 139312746
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Entry
139312746 CDS
T11059
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
139312746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcae04121
]
139312746
Enzymes [BR:
pcae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139312746
Ubiquitin system [BR:
pcae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139312746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
ANCHR-like_BBOX
zf-B_box
zf-RING_5
RING_XB3-XBAT31
DUF7756
Hema_HEFG
Motif
Other DBs
NCBI-GeneID:
139312746
NCBI-ProteinID:
XP_070793888
LinkDB
All DBs
Position
Unknown
AA seq
478 aa
AA seq
DB search
MATFIDPLSMFGLEEELTCSICLCVFQTPVTTPCGHNFCLPCLEMTWMEVEDTFSCPQCR
ASFETRPELKKNTVLCKAVEQFQISQDGLYKETGEEKAKSSPAKPRSPSPVACDSCLVVD
AAKTCFTCMASFCQEHLGPHLESPAFKSHQVVPVVKELQQKKCQAHSKLLEFFCQEHGVP
ICCFCLVSHKTCSTTPLKEAKEAKELQLRKRLTELRDLNDKAAKSMEEVRTQQKQLSNTT
SQKLDLLKSKFLEPVALIHEEENNCWKKIKTEEKRVLDKFEYAHTVLGKKKNEIQREQNE
IEVTLAEMDDTTFLKRSTKLRKISFNDVFVPRIELDQNLLGTFYKKACNLKDVTAQFLRI
SQEQEKKGNPDASVLPLKTPMVEEVCPAAAGKTSNPDASVLPLKTPMVEEVCPAAAGKTS
NPDASVLPLKTPMVEEVCPAAAGKTSIQSRWDAERRRRLKKRRKFNQSCDFPPANELH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcatcgacccgttgtctatgttcgggctggaagaggagctgacttgctcc
atctgcctgtgcgtttttcagacgccggtcactacgccctgcggccacaatttttgcctg
ccttgcctggagatgacctggatggaagtcgaggacaccttcagctgcccccagtgcaga
gcctctttcgaaacccgtcctgagctgaagaaaaacacggtgctctgcaaggcggtggag
caattccagatcagccaagatggcctctacaaagagacgggcgaggagaaggcgaagagc
agcccggctaagccgaggtctccctcgccagtggcctgcgacagctgcctggtggtcgac
gcggccaagacctgcttcacctgcatggcctccttctgccaggagcacctggggccccac
ctggagagcccggcgtttaagagccaccaggtggttccagtcgtgaaggaacttcagcag
aagaagtgtcaggcccacagcaagctcctggagttcttctgccaggagcatggagtcccc
atctgctgtttttgcctggtttctcacaagacctgctccactaccccactaaaagaggcc
aaggaagcaaaggagttacaactgaggaagagattaacagaactccgtgacttgaatgac
aaggctgcaaagtccatggaagaagtacgaacgcagcaaaagcaactcagtaataccact
agtcagaagctggatttgctgaaatcgaaattcctagaaccagtagctttaattcatgaa
gaagaaaataattgttggaagaaaatcaaaacagaagaaaaaagagtcttggataaattt
gaatacgcccatacagtgctgggcaagaagaagaatgaaatccagagggagcaaaatgaa
attgaagtgaccttggcagagatggatgacaccacatttttaaagagatcaacaaaactg
cggaagatatccttcaacgatgtattcgttcccagaatagagttggatcaaaacctgcta
ggcactttttataagaaagcctgtaacctcaaagacgttacagcacaatttttgcgtata
tctcaggaacaggaaaaaaaaggtaatcctgacgcttctgtactcccattgaagacgccc
atggtggaagaggtatgcccagcagctgcaggaaaaactagtaatcctgacgcttctgta
ctcccattgaagacgcccatggtggaagaggtatgcccagcagctgcaggaaaaactagt
aatcctgacgcttctgtactcccattgaagacgcccatggtggaagaggtatgcccagca
gctgcaggaaaaactagtatccagagtcggtgggatgcagaacggagaagacggcttaaa
aagcgccgtaaattcaaccaatcttgtgactttccgcctgccaatgaactccactga
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