Pituophis catenifer annectens (San Diego gophersnake): 139312828
Help
Entry
139312828 CDS
T11059
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139312828 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcae03019
]
139312828 (HNRNPA1)
03041 Spliceosome [BR:
pcae03041
]
139312828 (HNRNPA1)
Messenger RNA biogenesis [BR:
pcae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
139312828 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
139312828 (HNRNPA1)
Spliceosome [BR:
pcae03041
]
Common components
Common spliceosomal components
hnRNP proteins
139312828 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
PHM7_cyt
RRM_5
Motif
Other DBs
NCBI-GeneID:
139312828
NCBI-ProteinID:
XP_070794052
LinkDB
All DBs
Position
Unknown
AA seq
397 aa
AA seq
DB search
MSKSEGSSDYGCDLSPNASPKEPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMR
DPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKI
FVGGIKEDTEEHHLREYFELYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKY
HTVNGHNCEVRKALSKQEMASASSSQRGRSSSGSFGSGRGGGFGGGDSFNRGSNFGGRGG
FGSRSGGGGGGGGGGGYGGSGDGYNGFGNDGYGGSGPGYSGGSRGYGGSGSYDGYNNGGG
GFGGGSGGGSNFGSGGSYNDFGSYNNQSSSFGPMKGGNFGGRSSGPYGGSGGKEERSGAK
MPLFLTDGLSLDFPFLFKGLLSLMYHKPFKESYVATR
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaatctgagggatcgtctgattatgggtgcgatctgtcgcctaacgcatccccc
aaggaacctgaacagctgcgaaaactctttattggtggcctgagttttgagacaacagat
gagagccttcgcaatcattttgagcaatggggcacacttacagattgtgtggtaatgaga
gacccaaatactaagcgctccagggggtttggatttgtcacttactcaacagtggaggag
gttgatgctgccatgaatgccagaccacacaaggttgatggcagagttgttgaaccaaag
agagcagtatctagagaggattcccagagacctggagcacatttgacagtgaagaaaatc
tttgttggggggattaaggaagatacagaggagcaccatttgagggagtactttgaacta
tatggcaaaattgaagttatagaaataatgactgatcgaggcagtggcaaaaagaggggg
tttgcctttgttacttttgatgatcatgactctgtggacaagattgtcattcagaaatac
catactgtaaatggacataattgtgaagtccgaaaggctttgtcaaaacaagaaatggcc
agtgcctcttccagtcagcgaggtcgcagtagctctggaagttttggcagtgggcgtgga
ggtggatttggcggtggtgacagtttcaaccgtggtagcaattttggaggccgtggtgga
tttggcagccgcagtggtggaggtggaggaggaggaggaggaggaggatacgggggcagc
ggagatggctataatgggtttggcaatgatggttatggaggcagtggccctggatattct
ggaggaagccggggttatggtggcagtggaagctatgatggatacaacaacggcgggggc
ggctttggtggtggcagtggtgggggaagcaactttggaagtggaggaagctacaatgat
tttggcagttacaacaaccagtcttcaagttttgggcccatgaaaggaggaaactttgga
gggaggagctctggcccttatggtggaagtggtggaaaagaggaacggtctggtgctaaa
atgcctttgttcctgacagatggactgtctttggatttcccttttctttttaaaggactc
ctcagcttgatgtaccataaacctttcaaagaaagttatgttgctactaggtag
DBGET
integrated database retrieval system
