Pituophis catenifer annectens (San Diego gophersnake): 139312908
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Entry
139312908 CDS
T11059
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcae03400
]
139312908 (APEX2)
Enzymes [BR:
pcae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
139312908 (APEX2)
DNA repair and recombination proteins [BR:
pcae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
139312908 (APEX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
139312908
NCBI-ProteinID:
XP_070794216
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MKLVTWNVNGLRAGAGSAGLKQLLDSLGADLICLQETKITRDLLEEPLAIVEGYSSYFSF
SRTRSGYSGVATFCRASATPEAAEEGLSGLFTKHSGAVGCYGNTEDFTVDELKALDSEGR
AVLTRHRIRTSEQQETMLTVINVYCPRADPEKPERGDFKLQFYRLLQARAEALLRAGGHV
IILGDINTAHRPIDHCDPGDLESFQEHPGRRWLDGFLWEPGRDSENENLFVDTFRFLNPS
QDEAYTCWCNVTGSRHLNYGTRIDYILADCALALLELTDAQIMPEVLGSDHCPVQAVLKS
TCLAAPRCPPLCTRFLPEFAGIQQKLSRFLIKVEQTQLPEKGQKRDKAERTALGDLKKRR
TGPAQKGQGDLRSFFKAGNLDAEPVDGGRGQSVLNVVQRATAEDSGKQPPMKSAERIADK
CGVEEVSGVTQTPVKSPKKAPSKGVTSKAAMNCEKNTLPSTQNQSVLWKSLLPGPAHPPC
CKAHKEPCVLRTVKKQGPNCGRRFFVCARPLGKPSDPRARCDYFLWAS
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtgacttggaacgtgaacgggctccgggcaggagcggggtcggcggggttg
aagcagctcctggattctttgggagcggatcttatttgcttgcaggagactaagataacc
cgtgacctgttggaggaaccattggctatagtggagggctatagctcctacttcagtttc
agtcgcactcgcagtggctattcaggcgttgcaaccttctgtagagcaagtgccacccca
gaagcagctgaggagggcttgtctgggctgtttaccaagcacagtggagcagtcggttgt
tatggaaacacagaggacttcacagttgatgagctcaaggccctggacagtgaaggccgg
gcagttctaacccgtcatcgcatacgcacttcagaacagcaggaaactatgctgactgtc
atcaatgtgtattgccctcgcgctgaccctgaaaagccagaacgtggagacttcaagttg
caattctaccgcctcttgcaagcccgggctgaagctcttcttagagctggaggccatgtg
atcatcctgggagacatcaatactgcacacaggcccatcgatcactgtgatccaggagac
ttggaatccttccaggagcatcctgggcgccgctggctggacggtttcctttgggagcct
ggtagagattctgagaacgagaatctctttgttgatactttccgctttctgaacccaagt
caggatgaagcctacacttgctggtgtaacgtaacaggatcccggcatctgaactatggt
acccgcattgactacatcttggctgactgtgctctggcattgttggaactgaccgatgcc
cagatcatgccagaggtgctgggctctgaccactgtcccgtccaggctgtgctgaaaagt
acctgcttagctgccccacggtgtcccccgctctgcacccggttcctgcctgagtttgct
ggcatccaacagaagctcagccggtttctgataaaagtggaacagacccaactgcctgag
aaggggcagaaacgggacaaagcagagagaactgccttgggggatttgaagaaaaggcgg
accggcccagcacagaaagggcaaggggatttacgtagcttcttcaaagctgggaacttg
gatgctgagcctgtggatggtggaaggggccagtcagttttgaatgtggtccagagggcg
acagcagaggattctgggaaacagcctcctatgaagagtgctgaaaggatagctgataaa
tgtggggtggaggaagtctcaggggtaacccagacacctgtcaagagtccaaagaaggca
ccctccaagggtgtaaccagcaaggcagctatgaattgtgagaaaaacacacttccctct
acgcaaaatcagtctgtgttgtggaagtcactgctacctggccctgcacacccaccttgc
tgcaaggcccacaaagagccctgtgtgttgcggacagtgaagaaacaagggccaaattgt
ggacggcgcttctttgtctgtgcccggcctctggggaagccctcggatccccgtgcacgg
tgtgactacttcctgtgggccagctag
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