Pituophis catenifer annectens (San Diego gophersnake): 139312916
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Entry
139312916 CDS
T11059
Symbol
PLXNA3
Name
(RefSeq) plexin-A3 isoform X1
KO
K06820
plexin A
Organism
pcae Pituophis catenifer annectens (San Diego gophersnake)
Pathway
pcae04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pcae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
139312916 (PLXNA3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
TIG_2
PSI
TIG_plexin
PSI_PlexinA-B
Motif
Other DBs
NCBI-GeneID:
139312916
NCBI-ProteinID:
XP_070794230
LinkDB
All DBs
Position
Unknown
AA seq
1884 aa
AA seq
DB search
MWWLLLPVTIVAGVLLSWPPPVWGTRVVFTVTDMALTHLAVHHETGDVYLGAVNRIYKLS
ANLTQIRAHTTGPVPDDPRCYPPPGVRLCAHRLSPADNVNKLLLIDYAGNRLVACGSVWQ
GVCQLLRLEDLAKLGEPHQRKEHYLSGGREPDAMVGVIVEQLREPSQFFVGTSIGGRSEY
FPTLSSRRLTPDATSPEMFSLVYQDEFVSSQIKVPSDTLSLYPAFDIYYVSAFVSGGFVY
FLTLQLDTAQTPLEPAGGPVGPGATGGERFFSSKIVRLCANDTEFYSYVEFPLGCSKDGV
EYRLVQAAQLAKAGRQLAESLGIAEGQDVLYAAFSQGQKNRAAPPRESLLCLFTLDEVNQ
RIRERIQSCYRGEGRLSLPWLLNKELPCINTPMQINGNFCGLVLNQPLGGLQVIEGRPLL
QEQTEGMASVAAYTYRGHSVVFIGTRAGNLKKVRVDNPDEAHLYESVPVMPGEPILRDMV
LSPDQRYLYLLSQRQVVQLPVENCGQYLSCADCLGSRDPHCGWCVLHNRCCRESECPRAA
EPHRFTATLTQCVQLLVEPSNISVTEPSIVLQLTVHNVPDLSSGVTCSFEGLGESEGQLQ
VDGGIHCLSPTLRDEPPGEYGDVRTVRIQLLSKETGMEFASTNFVFYDCSLLRTCLSCVS
SHYPCHWCKYRHTCTHNVAKCFFLEGRVNTAEGCPELLPGGEILIPVGVLQPITLRAKNL
PQPQSGQKNYECVLGIQGRQQRVPAVRFNSSSVQCQNTSYWYDGEELGELPLDFDVIWDG
DFAIDKPPGFKALLYKCSAQRSSCGLCLKSDPRYECGWCVPERRCLLRPHCPASRQNWVP
PGRRGARCTHPRITQVLPLTGPKEGGTRVTVWGENLGLHFYEVGVRVAGVRCSSLPAEYI
SAERLVCELEPSLLPDPPPGPVELCVGDCSADYRTQSDTPFTFVTPSFWGVDPERGPTSG
GTKISLLGNHLDAGSNVTVAIRGAPCRLIRRSAGEIVCLSPPSALGPGPANLSLRIDRAN
ISTNGTVFFRYSPDPVVTAVEPAWSIANGSTSLTVSGTHLLTIQEPRVRAAYGGIETINS
CQVLNDSIMLCKAPGIIPREQALPLGGAHPDEFGFLLDDVAATRTLNRSAFTYYPDPTFE
TFGPSGILEIKPGSHVVLKGRNLIPAVSGSTRLNYTVLIGGEPCTLTVSETQLLCDSPSQ
TGEQPVMILVGGLLFSPGTLHIYPEAALPLPALVGLGAGGSLLLGAIIGVLVAYKRKTRD
ADRTLKRLQLQMDNLESRVALECKEAFAELQTDINELTNNMDGVKIPFLDYRTYARRVLF
PGVDDHPALQETSTPPSTEKGLRLFGQLLHTRPFLLTFIHTLEGQRGFSMRDRGAVASLT
MVALQGRLDYATGVLKQLLADLIEKNLQNRAHPKLLLRRTESVAEKMLTNWFTFLLHRFL
KECAGEPLFMLFCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYKTLTLLCTPPEPP
GGPAVPVKVLNCDSVTQVKEKLLDAVYRGVPYSQRPRAEDMELEWCQGAGGRTILQDEDA
TSKIEGDWKRLNTLGHYQVADGSTVALVPRQASGYNIASSFTFTHSLSRYESLLRTSSSP
ESLRSRAPILTPDQDSGTRLWHLVKNHEHLGDPKEGERGSKMVSEIYLTRLLATKGTLQK
FVDDLFETVFSTAHRASALPLPIKYMFDFLDEQAERRQIGDPDVRHTWKSNCLPLRFWVN
VIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHRLGKDSPSTKLLYAKDIPVYKGW
VERYYRDITKMASISDQDMDAYLVEQSRQHAGEFNTLGALGELYSYVGRYRDEILTALER
DAACRKHKLKPKLEQVTTLVSGTS
NT seq
5655 nt
NT seq
+upstream
nt +downstream
nt
atgtggtggctgctccttcctgtcaccattgtagctggtgtcctgctctcctggccaccc
cctgtttggggcacccgtgttgtcttcacggtcacagacatggcccttacccatctggct
gtgcaccatgagactggggatgtctacttgggtgccgtcaaccgcatctacaaactctca
gccaacctgacccagatacgggctcacaccacggggccagtgccggatgaccccagatgc
taccctcccccaggtgtccggctctgtgcccatcggctgtcccctgctgacaatgtcaac
aagctgcttctgattgactatgctggcaaccgtcttgtggcctgtggcagtgtttggcag
ggagtgtgccagctcttgcggttggaggacttggccaaactaggggagcctcaccagcgc
aaagagcactacctttcggggggccgtgaaccagacgccatggtcggtgtgattgtggaa
cagctgagagagcccagccagttctttgtgggcacttcaatcggaggacgttcggagtac
ttccctacactctccagccgccggcttactcctgatgccaccagcccagagatgttcagc
ctggtgtatcaggatgagtttgtctcttctcaaatcaaggtcccttctgacactctctcg
ctctaccctgcctttgatatctactacgtgtctgcatttgtgtctggcggttttgtgtac
ttcctcactttgcagcttgacactgctcagacacccctcgagcctgccggaggtcccgtt
ggccctggcgcaacaggtggggagcgcttcttttcatccaagattgtgcgcctgtgtgcc
aatgacacagagttctactcttatgtggaatttcctctgggctgctccaaggacggggtg
gaataccgtctggtccaagcggctcagctggccaaagctggccgacaattggccgagtcg
ctgggcattgcagaagggcaagatgtgctttatgccgctttctcgcaaggccagaagaac
agggcagcaccaccccgggagagcctgctctgccttttcacgctggatgaagtcaatcaa
cgcatccgtgagcgtatccagtcatgctaccgtggtgaagggcgactctctctaccgtgg
cttctcaacaaagaattgccctgcatcaacacgcccatgcagatcaatggcaatttctgt
ggattggtactgaaccaacccctaggagggctgcaggtcatcgagggacgcccgttgctc
caagaacagaccgagggcatggccagtgttgctgcttatacctatcgtggccattcggtc
gtcttcattggaacccgtgctggcaacctgaagaaggttcgtgtggacaatccagatgag
gcccatctttatgagtctgtgccagtgatgcctggagaacctatactgcgtgacatggtc
ctgagtcctgaccagcgctacctctatttgctcagccagagacaggtggtgcagcttcct
gtggagaattgtgggcaatatctttcctgtgccgattgcttgggctcccgagacccacac
tgtggctggtgtgtcctgcacaataggtgctgtagagaaagcgagtgcccccgtgctgca
gaaccccaccgctttacagccactctgacacaatgtgtgcagttgctggttgagcccagt
aatatctcagtgacagaacctagcattgtgcttcagcttacagtccacaatgtcccagac
cttagttctggtgtgacttgctcctttgaaggccttggtgagagcgagggacagcttcag
gtagatggagggatccactgcctttcacctactttgagggatgagccccctggagaatat
ggtgatgtacgaactgttaggatccaacttctgtccaaggaaactggcatggaatttgcc
agtacaaactttgtcttttatgattgcagccttctacgcacgtgcttgtcctgtgtcagc
agccactatccgtgccactggtgtaaatacaggcatacgtgcacccacaatgtggccaag
tgcttcttcctagagggccgagtcaacactgctgagggctgcccagagctccttcctggt
ggggagatcttgattcctgtgggagtgttacaacccattacactgcgtgccaagaacctt
ccacaacctcagtcgggccagaagaattacgaatgtgtcttgggaatccaaggtcgccaa
cagcgggtgccagctgtacgcttcaactccagcagcgtacagtgccagaatacctcgtat
tggtacgatggtgaggagttgggtgaactccctctggactttgatgtcatttgggatgga
gattttgccattgacaagccaccaggattcaaagctctcttgtataagtgttcggcccag
cgttctagctgtggattgtgcctcaaatcagatccacgttatgagtgtggttggtgtgta
cctgaacgccgttgccttttgcgtcctcactgtccagcttccaggcaaaattgggtgcca
cccggtcgacgtggggctcgttgtactcaccctcgtattacacaggtattgccactgact
ggtcccaaggaaggtgggactcgggtgacagtttggggtgaaaacctagggcttcatttc
tatgaggtcggtgtacgggtagcaggtgtccggtgtagctctctccctgcagaatacatc
agtgctgagaggctggtgtgtgaacttgagccctcacttttgccagatcctcccccaggt
cccgtggagctctgcgtaggggactgcagtgcagactaccggacccagtcggatactcct
ttcacctttgtgacccccagcttttggggggtcgacccagaacgaggtcctacctcaggt
gggacaaaaatcagcctccttggaaatcaccttgatgctgggagcaatgtcacagttgca
attcgaggagcaccatgtcgcctaatcaggcgtagtgcaggggagattgtctgcctgtct
cccccctcggcattaggcccaggtcctgccaacctcagtcttcgcattgatcgtgccaac
atcagcacaaatgggacagtcttcttccgctatagtcccgacccagtggtcacagccgta
gagcctgcttggagtattgcaaatggtagcacaagcctcacagtgagtgggacccacctc
ttaacaattcaggaaccacgggttcgggctgcttatggcgggatagaaaccatcaatagt
tgtcaagtgctaaatgactccataatgttgtgcaaggccccgggcattatacctcgggag
caggcactgccccttggaggtgctcaccctgatgagtttggcttcctcttggatgatgtg
gctgccacccggaccctgaaccgttctgcttttacatactatccagacccgacttttgag
acctttgggcccagcggcatactggaaattaaacccggatcccacgttgtcctcaagggc
cggaatctgatccctgcagtatccggcagtacacgactcaactacacagtgctgattggt
ggagaaccttgcaccctgactgtctcagaaacccaattgttgtgtgattcgccaagccaa
actggagagcagccagtcatgatcctggtgggaggtctgttattctctccaggcaccctt
cacatctatcctgaggcagccttgcctttgccagctctggtgggcttaggggcaggagga
agcctccttctaggggctatcattggggtgctggtagcctacaaacggaagacacgggat
gcagaccgtactctgaagcgcctgcagctgcagatggacaacctggagtcacgggtggct
ctggaatgcaaggaagcttttgctgagttgcagacagatattaacgagctgacaaacaac
atggatggtgtgaagatcccattcctggattatcggacatatgcaaggcgtgtgctcttt
ccgggggtggatgatcacccagcacttcaagaaaccagtacaccaccaagcacagagaaa
gggctccgtctctttgggcagttactacacactcggcctttcctgctgaccttcatccac
accctggaaggccagcgaggtttctccatgcgagatagaggcgctgttgcttctctgacg
atggtggccctgcagggcaggcttgactatgctactggggtgctgaagcagctgctggct
gacctcattgagaagaatctgcagaaccgtgcccaccccaagctgttgctccgccggacg
gagtcagtggctgagaaaatgttgaccaattggtttacttttctgctgcataggttcctg
aaggagtgtgctggggagccattattcatgctgttctgtgccatcaagcagcagatggag
aaaggcccaatagatgccatcacaggcgaggcacgctactcgttgagcgaggacaagctc
attcgccagcagattgattacaagaccttgacattattatgcacccctcctgagccacct
gggggacctgcagtgcctgttaaagttttaaactgtgattcagtgacacaagtgaaggag
aagctcctagatgccgtatatcgaggagtaccctattcgcagcggccacgagctgaagac
atggagctagagtggtgtcagggtgctgggggacggaccatcttgcaggatgaagatgcc
acaagtaaaattgagggagactggaagcggctcaacacgttgggacattatcaggtagca
gatggctccacggtggccttggttcctaggcaggcatcaggctacaatattgcaagctcc
ttcactttcacccattcgctgagtcgctatgagagtttgttgcgtacttccagcagtcca
gagagcttgcgctcaagagctcccatcctcactccagatcaagattcaggcacccgcctc
tggcatctggttaagaaccacgagcatctcggagaccccaaggaaggggagcgagggagc
aagatggtttctgagatctacctcacccggcttcttgccaccaagggtacattgcagaag
tttgttgatgatctgtttgagacagtgttcagcacagcacaccgggccagtgcccttccc
ttgcccatcaaatacatgtttgacttcctggatgaacaagcagagcggagacagattggt
gatcctgatgttcgacatacctggaaaagcaactgtttgcccttgaggttttgggtgaat
gtcatcaagaacccacagtttgtttttgatattcacaagagcagcatcacggacgcttgc
ctctccgttgtggcccagaccttcatggactcgtgctccacctctgagcaccgcctgggc
aaggattccccttcgacaaagctattatatgccaaggatatccctgtttataaaggctgg
gtggaaaggtactaccgggacatcaccaagatggcttccattagtgaccaagacatggat
gcctacctagtagagcaatcccgtcagcacgcaggggaatttaacacgttgggtgcactg
ggagagctctacagctatgtgggaaggtaccgtgatgagatcctgactgcgttggaacgg
gatgctgcctgccggaaacacaaactgaagccgaagctggaacaagtcaccactcttgtt
tcgggaacaagctga
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